Frank Hubacz: Ice in the Bering Sea, May 7, 2013

NOAA Teacher at Sea
Frank Hubacz
Aboard NOAA ship Oscar Dyson
April 29 – May 10, 2013

Mission: Pacific Marine Environmental Laboratory Mooring Deployment and Recovery
Geographical Area of Cruise: Gulf of Alaska and the Bering Sea
Date: May 7, 2013

Weather Data from the Bridge (0500):
N wind 10 to 25kt. Partly cloudy.
Air Temperature 0.8C
Relative Humidity 90%
Barometer 1019.80 mb
Surface Water Temperature 2.30 C
Surface Water Salinity 31.96 PSU
Seas 4 to 9ft

Science and Technology Log

Remember that in my last blog you were left with a question…

Did you figure out what this was?

Did you figure out what this was?

If you still have not guessed what this is then here is a hint…

 

You are correct!  This is a Marine Assessment Monitoring and Prediction (MARMAP) Bongo tow with two 20cm and two 60 cm ring openings!  The 60 cm ring has a 500µm mesh net and the 20 cm ring has a 150µm.  I knew that most of you would guess the correct answer.  These nets are towed through the ocean to collect zooplankton samples. Plankton are important members of the ocean food web converting energy from the primary producer level into a form that is useable by animals in the upper levels of the marine food web. The word plankton is derived from the Greek word planktos, which means wandering.  Plankton drift, or swim weakly, traveling wherever the ocean takes them.  Phytoplankton are able to produce their own food (autotrophic), as the name suggests, via the process of photosynthesis. Zooplankton are heterotrophic and eat the primary producers in the ocean food web, the phytoplankton.  Zooplankton are the most numerous consumers in the entire ocean with nearly every major animal group being represented.   The most abundant, accounting for 70% of individuals, are copepods (crustaceans).  You are all probably most familiar with the organism within this group known as krill.  They are very abundant in the waters of the Arctic.

Krill

Krill

These shrimp-like marine organisms grow no larger than 4 to 6 cm and serve as food for baleen whales, penguins, seals, fish, sea birds, and many other predators.  80(+) species of krill have been identified in oceans around the world. Their habitats range from abyssal depths (5,000 m) to near shore kelp beds (10 m), and from warm tropical seas to the freezing Antarctic Ocean. (http://oceanexplorer.noaa.gov/explorations/02quest/background/krill/krill.html)

Marine scientist use bongo nets to catch these small creatures and study them. The net size is selected to catch zooplankton as opposed to smaller phytoplankton.  The bongo net has a flow meter installed in each net to calculate the volume of water sampled.   Plankton tows can be done at any depth or time of day and the samples are caught in a small rigid container, the codend.

Basic Bongo tow

Detailed Bongo schematic

 

Cod-end of  Bongo tow net

Codend of Bongo net where the sample is collected

Our night shift deploying our Bongo net

Our night shift readying our Bongo net

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Deploying the Bongo net in dark icy waters of the Bering Sea

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Retrieving the net after the tow

Matt washing the contents of the codend into a straining sieve

Matt washing the contents of the codend into a straining sieve

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Capturing all of the sample

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Krill!

A closer look!

A closer look!

The Bongo tow used on this cruise also has attached an SBE-19 SEACAT system which measures salinity, depth, and temperature.

SEACAT System attached to Bongo tow

SEACAT System (on right) attached to Bongo tow

Additionally deployed on this cruise were drogue drifters.  Drogue drifters help determine the flow of ocean currents using a sort of “message in a bottle” approach, the drogue drifter, which is connected to a surface buoy.  The buoy communicates its location to an ARGOS satellite system producing a map of its path.  The drogue portion is really a “holey-sock” that flows below the surface to indicate subsurface ocean currents.

Drifter Schematic

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Complete drifter package

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Bill preparing the drogue drifter for launch
Drogue
Drogue drifter entering the water with attached satellite buoy

World map of current drifter locations

 

Overnight on the 7th we turned north-north-west hoping to sample water near the edge of the ice sheet.  We found ice much earlier than hoped and at approximately 0630 a decision was made that we could travel no further!  Upon collecting a sample at this station we turned south to sample along the 70 meter line for several miles.

Ice flow...picture taken at 0300

Ice flow…picture taken at 0300

Ice all around

Ice all around

 

Ice as seen from the bridge(Photo courtesy of Matt Wilson)
Ice as seen from the bridge(Photo courtesy of Matt Wilson)
Saying good bye to the ice!

Saying good bye to the ice!(Photo courtesy of Matt Wilson)

Personal Log

Sampling continues around the clock now that all of the moorings have been deployed.  I continue to collect nutrient samples from each CTD launch, usually 5 to 7 per draw, assist with washing the Bongo nets, and helping wherever I can .  Our midnight to noon shift goes by quickly.  After my shift I have been relaxing by reading and then going to bed by 0300 before waking at 2300.  Now that we are heading south our satellite “issues” have been resolved and so the internet works great.  Keep those questions coming.

We had an abandon ship drill today and I finally was able to “slip” into my Survivor Suit!  You will get to meet the science crew in my next blog!

Slipping into my survival suit

Slipping into my survival suit

Heading for the life boat station

Heading for the life boat station

Arriving at the WRONG station!

Arriving at the WRONG life boat station! (Port is left)

Emilisa Saunders: A Desert Dweller Goes to Sea, April 30, 2013

NOAA Teacher at Sea
Emilisa Saunders
Aboard NOAA Ship Oregon II
May 14 – 30, 2013

Mission: SEAMAP Spring Plankton Survey
Geographical Area of Cruise: Gulf of Mexico
Date: Tuesday, April 30, 2013

Personal Log

Hello, and welcome to my blog! My name is Emilisa, but you can call me Emmi. I’m about to go on the adventure of a lifetime, and I’m so glad you’ve decided to join me.

Annular Eclipse

Standing in the light of an annular eclipse at the Springs Preserve.

For six years now, I’ve worked at the Springs Preserve in Las Vegas, Nevada, where I have the best job: I’m a Naturalist, which means I get to teach kids and their families about nature. Some of you may know me from the Nature Exchange, which is a natural item trading center where kids bring items they’ve collected from nature – rocks, fossils, sea creatures, dead bugs, plant parts, etc. – to learn about those objects and trade them for other natural items from all over the world. This program is so much fun, more than 8000 kids have signed up to trade in the past six years. It’s a ton of fun for me, too. Every day I soak up whatever knowledge I can about the natural world so that I can show kids all that there is to love about nature, science and learning.

Last Fall, I heard about a program that lets teachers explore nature and science in the most amazing way: the teachers help scientists study sea creatures from aboard an actual research ship at sea! This program is called Teacher at Sea, and it is offered by the National Oceanic and Atmospheric Administration, or NOAA. NOAA is in charge of studying the weather, climate, oceans and shores. They share what they learn with all of us, and help to protect our environment and natural resources. Through the Teacher at Sea program, NOAA chooses 25-30 teachers each year to spend several weeks aboard ships, learning about how NOAA scientists study amazing ocean environments, about the jobs that people do at sea, and about how teachers can use science skills to study the natural world.

As soon as I heard about the Teacher at Sea program, I knew I had to apply. What an amazing opportunity! I sent my application and waited very impatiently for a couple of months. I checked my email every day, even when I knew it was far too early to find out. Finally, I got the email I had been waiting for: I had been chosen for the program! On May 14th, I’ll be heading out to sea to study plankton in the Gulf of Mexico on the NOAA ship Oregon II!

NOAA Ship Oregon II

NOAA Ship Oregon II, courtesy of NOAA

The Oregon II is like a floating science lab. It sails out of Pascagoula, Mississippi, and is 170 feet long, which is more than half the length of a football field. On the ship, scientists collect samples of living creatures from the Gulf of Mexico, the Caribbean Sea, and the Atlantic Ocean, so that they can study how healthy the oceans are. There are labs right on board the ship, and the scientists bring samples back to be studied in labs on shore, too.

You can actually track the ship while it’s at sea to see where we are in the Gulf! Just click here and select the Oregon II: NOAA Ship Tracker

The Narrows

Hiking the Narrows at Zion National Park with my husband, Doug.

Now, I love adventures that let me spend time in nature. I love to hike and go for long runs, and I’m even learning to SCUBA dive with my husband, Doug. Even so, this is going to be a very new experience for me. I grew up in the tiny state of Vermont, which has lots of mountains and snow, but no oceans. I spent my summers swimming in lakes and ponds and only traveled to the Atlantic Ocean a few times. I spent just a few hours here and there on whale watching boats, and that’s it! Then, nine years ago, I moved even farther away from the ocean to Las Vegas, in the middle of the Mojave Desert, where I fell completely in love with the hot, dry land and the tough creatures, large and small, that survive here.  I love to take trips to the ocean as often as possible, but I definitely spend most of my time landlocked!

When I’m on the Oregon II, I’ll be seeing, doing and learning things I never have before. I’ll get to know what it’s like to eat, sleep, work and live on a ship, and I’ll meet all the people who work hard to make the ship run. For the first time, I’ll also get to work with scientists and learn about the skills and tools they use to study creatures in the ocean. I can’t wait to meet all of these people who work at sea!

On this cruise, we’ll be collecting and studying plankton, which are the tiny plants and animals that drift in the ocean currents. Some of them are so small that we can’t see them without a microscope, but the entire ocean depends on them for food, and the whole world depends on them for the oxygen that we breathe. The plankton that we’ll be looking at the most closely are bluefin tuna eggs and larvae; larvae are very young fish. I still have a lot to learn about plankton, but I came across this amazing video; it’s beautiful to watch and is very interesting, too!

But there is one thing that I’ve learned by studying nature and teaching kids about the environment: everything is connected. Even though I’ll be travelling far away and studying ocean life, I’ll be able to come back to Las Vegas and teach families all about how our actions here in the desert affect other habitats all over the world. I am so excited that being a Teacher at Sea will help me show the kids I meet at the Springs Preserve all about how healthy oceans keep our desert healthy, too, and how they can grow up to be the scientists or ship crewmembers who protect our oceans.

I hope you check back on this blog from time to time to learn more about NOAA, plankton, and life at sea! I can’t wait to get started!

Kaitlin Baird: Let the Fishing Begin! September 8, 2012

NOAA Teacher at Sea
Kaitlin Baird
Aboard NOAA Ship Henry B. Bigelow
September 4 – 20, 2012

Mission: Autumn Bottom Trawl Survey with NOAA’s North East Fisheries  Science Center
Geographical Area: Atlantic Ocean steaming to south New Jersey coast
Date: September 8th
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Location Data:
Latitude: 38° 44.58’   N
Longitude: 73 ° 39.30’  W       

Weather Data:
Air Temperature: 23.2°C (approx. 74°F)
Wind Speed: 5.05 kts
Wind Direction: from N
Surface Water Temperature: 25.29 °C (approx. 78°F)
Weather conditions: Sunny and fair

Science and Technology Log
Other than testing out the FSCS today and learning the ropes, I also learned about another type of tow we are doing on this cruise. When looking at fish stock assessment it is also important to look at the base of the food chain, you guessed it, plankton. Today we were specifically targeting zooplankton, microscopic animal drifters in the ocean that are an important food source for many of the fish and other invertebrates that we are surveying.

When I saw the nets go in, they looked a bit different than those on the R/V HSBC Atlantic Explorer, and I learned a new term, BONGO net. This is the tandem net which we are using  to tow for zooplankton at set locations while we are en route. Unlike the trawl net we tow these on the side of the ship verses the back so there is no interference by the wake made by the ship as it moves through the water. If you imagine a giant windsock with a plastic catchment at the end, this is what these nets look like. The pressure of the water moving through the net forces anything heavy to the “cod end” of the net and sieves the water out of the mesh that makes up the net.

The depth of the net tow is dependent upon bottom depth and protocol at each site, but they normally try to tow pretty close to the bottom (=/- 10 m). A separate, Conductivity, Temperature and Depth (CTD) recorder is also deployed with the nets to understand more about the ocean chemistry at set locations.  There is such a variability when towing for plankton (as it can be quite patchy) that having the two nets gives you more opportunity to capture the diversity of life that is out there. The nets are also two different mesh sizes so that they can catch zooplankton in different size classes.

Bongo Nets

Bongo Nets being deployed to 60 feet

Personal Log
It was great to get fishing today off of the coast of Maryland. We were all ready to sort anything that came down the conveyer belt. The species get sorted and then brought to the FSCS stations. Here they are measured along with anything else that needs to be done to them. I helped to get otoliths prepared and input data on gut contents, condition and sex.
Kaitlin in the wetlab with left eye and right eye flounder

Kaitlin in the wetlab with left eye and right eye flounder

One of the things I noticed were a lot of flounders, both left eye and right eye. That’s right folks, flounder usually start with one eye on each side of their heads and then eventually (species dependent) it migrates as they mature so that they sit on the bottom with both eyes on top of their heads. Depending on which way they migrate they are designated as “left eye” or “right eye” as you can see in the photos below. Did you know? These eyes can move independently of each other, pretty cool stuff!
Right Eye Flounder (Top) Left Eye Flounder (bottom)

Right Eye Flounder (Top) Witch Flounder
Left Eye Flounder (bottom) Four spot Flounder

Stay tuned for more critters! Here is just a shortlist of some that we saw today!

Rosette Skate
Little Skate
Tilefish
Goosefish
Chain dogfish
Fawn cusk-eel
Gulf stream flounder
Four spot flounder
Silver hake
Armored sea robin
LOTS of Squid

Bye for now!

Bhavna Rawal: Net Tow, Dive, Buoy Maintenance and Data Collection, August 8, 2012

NOAA Teacher at sea
Bhavna Rawal
On Board the R/V Walton Smith
Aug 6 – 10, 2012

Mission: Bimonthly Regional Survey, South Florida
Geographic area: Gulf of Mexico
Date: August 8, 2012

.
Weather Data from the Bridge:
Station: 21.5
Time: 1.43 GMT
Longitude: 21 23 933
Latitude: 24 29 057
Wind direction: East of South east
Wind speed: 18 knots
Sea wave height: 2-3 ft
Clouds: partial

Science and Technology Log:

Yesterday, I learned about the CTD and the vast ocean life. Today I learned about a new testing called net tow, and how it is necessary to do, and how it is done.

What is Net Tow? The scientist team in the ship uses a net to collect sargassum (a type of sea weed) which is towed alongside the ship at the surface of the predetermined station.

A net to collect sargassum (a type of sea weed)

A net to collect sargassum (a type of sea weed)

How did we perform the task? We dropped the net which is made of nylon mess, 335 microns which collects zooplanktons in the ocean. We left this net in the ocean for 30 minutes to float on the surface of the ocean and collects samples. During this time the ship drives in large circles. After 30 minutes, we (the science team) took the net out of the ocean. We separated sargassum species, sea weeds and other animals from the net. We washed them with water, then classified and measured the volume of it by water displacement. Once we measure the volume, we threw them back into the ocean.

Dropped the net which collects zooplanktons in the ocean

Dropped the net which collects zooplanktons in the ocean

Types of sargassum

Types of sargassum

Measured the volume of it by water displacement

Measured the volume of it by water displacement

Threw them back into the ocean

Threw them back into the ocean

Record data

Types of Sargassum and Plankton:  There are two types of sargassum; ones that float, and the other ones that attach themselves to the bottom of the ocean. There are two types of floating sargassum and many types attached to bottom of the ocean.

Also there are two types of plankton; Zooplankton and phytoplankton. As you all know phytoplankton are single celled organisms, or plants that make their own food (photosynthesis). They are the main pillar of the food chain. It can be collected in a coastal area where there is shallow and cloudy water along the coastal side. The phytoplankton net is small compared to the zooplankton and is about 64 microns (small mess).

Zooplanktons are more complex than phytoplankton, one level higher in their food chain. They are larva, fish, crabs etc. they eat the phytoplankton. The net that is made to catch zooplankton, is about 335 microns. Today, we used the net to collect zooplankton.

Why Net Tow is necessary: Net tow provides information about habitats because tons of animals live in the sargassum. It is a free floating ecosystem. Scientists are interested in the abundance of sargassum and the different kinds of animals, such as larva, fishes, crabs, etc. Many scientists are interested in the zooplankton community structures too.

Dive, Buoy and other data collection equipments: Two science team members prepared for diving; which means that they wore scuba masks, oxygen tanks and other equipment. They took a little boat out from the ship and went to the buoy station. They took the whole buoyancy and other data collection instruments with them. The two instruments were the Acoustic Doppler (ADCP) and the micro cat which was attached to the buoy. The micro cat measures salinity and temperature on profile of currents, and the ADCP measures currents of the ocean. Both instruments collect many data over the period. The reason for bringing them back, is to recover data in a Miami lab and the maintenance of the buoy.

The micro cat measures salinity and temperature on profile of currents

The micro cat measures salinity and temperature on profile of currents

Acoustic Doppler (ADCP) measures currents of the ocean

Acoustic Doppler (ADCP) measures currents of the ocean

Personal Log:

My first day on the ship was very exciting and nerve-racking at the same time. I had to take medicine to prevent me from being seasick. This medicine made me drowsy, which helped me to go to sleep throughout the night. The small bunk bed and the noise from the moving ship did not matter to me. I woke up in the morning, and got ready with my favorite ‘I love science’ t-shirt on. I took breakfast and immediately went to meet with my science team to help them out for the CTD and net tow stations. Today, I felt  like a pro compared to yesterday. It was a bit confusing during the first day, but it was very easy today.

I started helping lowering the CTD in the ocean. Now I know when to use the lines for the CTD, water sampling for different kinds of testing, how to net tow and do the sargassum classification. I even know how to record the data.

When we have a station call from the bridge, then we work as a team and perform our daily CTD, water testing or net tow. But during the free time, we play card games and talk. Today was fun and definitely action packed. Two science team members dove into the ocean and brought the buoy back. I also saw a fire drill.

Nelson (the chief scientist) took me to see TGF or called the flow through station which is attached inside the bottom of the ship. This instrument measures temperature, salinity, chlorophyll, CDOM etc. Nelson explained the importance of this machine. I was very surprised by the precise measurements of this machine. Several hours later, I went to the captain’s chamber, also called the bridge. I learned how to steer the boat, and I was very excited and more than happy to sit on the captain’s chair and steer.

Excited to sit on the captain’s chair and steer the R/V Walton Smith

We have also seen groups of dolphins chasing our ship and making a show for us. We also saw flying fishes. In the evening, around 8 o’clock after dinner, I saw the beautiful colorful sunset from the ship. I took many videos and pictures and I can’t wait to process it and see my pictures.

Saw groups of dolphins ahead of ship

Around 10 o’clock in the night, it was net tow time again. We caught about 65 moon jelly fishes in the net and measured their volumes. Nelson also deployed a drifter in the ocean.

See moon jelly fish in my hand

Today was very fun and a great learning opportunity for me, and don’t forget the dolphins, they really made my day too!

Question of the Day:
How do you measure volume of solid (sea grass)?

New Word:
Sargassum

Something to Think About:
Why scientists use different instruments such as CTD as well as TFG to measuretemperature, salinity, chlorophyll, CDOM etc?

Challenge Yourself:
Why abundance of sargassum, types of animals and data collection is important in ocean?

Did you Know?
The two instruments were the Acoustic Doppler (ADCP) and the micro cat which was attached to the buoy. The micro cat measures salinity and temperature on profile of currents, which means it measures at surface of the ocean, middle of the ocean and bottom layer of the ocean too.

Animals Seen Today:
Five groups of dolphins
Seven flying fishes
Sixty five big moon jelly fishes
Two big crabs

Valerie Bogan: The Journey Ends, June 20, 2012

NOAA Teacher at Sea
Valerie Bogan
Aboard NOAA ship Oregon II
June 7 – 20, 2012

Mission: Southeast Fisheries Science Center Summer Groundfish (SEAMAP) Survey
Geographical area of cruise: Gulf of Mexico
Date
: Wednesday June 20, 2012

Weather Data from the Bridge:
Sea temperature 28  degrees celsius, Air temperature 26.4 degrees celsius.

 Science and Technology Log:

Well we have come to the end of the cruise so now it is time to tie it all the pieces together.  The Gulf of Mexico contains a large ecosystem which is made up of both biotic (living) and abiotic (nonliving) factors.  We studied the abiotic factors using the CTD which records water chemistry data and by recording information on the water depth, water color, water temperature, and weather conditions.  We studied the living portions of the ecosystem by collecting plankton in the bongo and neuston nets.  The health of the plankton depends on the abiotic factors such as water temperature and water clarity so if the abiotic factors are affected by some human input then the plankton will be unhealthy.  The trawl net allowed us to collect some larger organisms which occupy the upper part of the food web.  Some of these organisms eat the plankton while others eat bigger creatures which are also found in the trawl net.  Despite what they eat all of these creatures depend on the health of the levels below them either because those levels are directly their food or because those levels are the food of their food.

The Gulf of Mexico Ecosystem

An illustration of how the food web in the gulf works. (picture from brownmarine.com)

The ecosystem of the Gulf of Mexico has taken a couple of large hits in the recent past, first with Hurricane Katrina and then with the Deepwater horizon oil spill.  When an ecosystem has undergone such major events it is important to monitor the species in order to determine if there is an effect from the disasters.  Hurricane Katrina left its mark on the people of the Gulf coast but did minimal damage to the biotic parts of the ecosystem.  The effects of the deepwater horizon oil spill are still unknown due to the scope of the spill.

Today’s portion of the ship is the engine room.  I was recently taken on a tour of the engine room by William.  The ship is powered by two diesel engines which use approximately 1,000 gallons of fuel per day.  The ship obviously uses the engines to move from location to location but it also uses the energy to power generators which supply electrical energy, to air condition the ship and to make fresh water out of sea water.

The engines.

The twin diesel engines.

Generators

Generators

There are two vital positions on the Oregon II that I have not discussed, deck worker and engineer.  We could never have collected the samples that we did without the immense help of the deck workers.  They operated the winches and cranes that allowed us to deploy and bring back the nets which captured our samples.  The engineers kept the ship’s engines running, the electricity on, and the rooms cool.  Some of these men started out their careers as merchant marines.  A merchant marine is a person who works on a civilian-owned merchant vessel such as a deep-sea merchant ship, tug boat, ferry or dredge.  There are a variety of jobs on these ships so if you are interested in this line of work I’m sure you could find something to do as a career.  A few merchant marines work as captains of those civilian ships, guiding the ship and commanding the crew in order the get the job done.  More of them serve as mates, which are assistants to the captains.  These people are in training to one day become a captain of their own ship.  Just like on the Oregon II there are also engineers and deck workers in the merchant marines.  Engineers are expected to keep the machinery running while the deck workers do the heavy lifting on the deck and keep the ship in good condition by performing general maintenance.

During this cruise I have met a lot of people who have different jobs all of which are related to collecting scientific data.  The bridge is wonderfully staffed by members of the NOAA Corps.  These men and women train hard to be able to sail research ships around the world.  To find out more about a profession with the NOAA Corps go visit the Corps’ webpage.  There are a large number of scientists on board.  These scientists all specialize in the marine environment and there are many wonderful universities which offer degrees for this field of study.  Go here to get some more information on this scientific pursuit.  The engineers and deck crew keep the ship running. To learn about these professions go to The United States Merchant Marines Academy.  The stewards are instrumental in keeping the crew going on a daily basis by providing good healthy meals.  To learn more about working as a steward read about the Navy culinary school.  The ship could not continue to operate without each of these workers.  Nobody is more or less important than the next–they survive as a group and if they cannot work together the ship stops operating.

Personal Log

Well my journey has come to an end and it is bitter-sweet.  While I’m happy to be back on land, I’m sad to say goodbye to all of the wonderful people on the Oregon II.  When I was starting this adventure I thought two weeks was going to be a long time to be at sea, yet it went by so fast.  Although I’m tired, my sleep and eating schedule are all messed up, and I have some wicked bruises, I would do it again.  I had a great time and in a couple of years I have a feeling I will be once again applying for the Teacher at Sea Program.

It should be no surprise to those that know me best that I love animals which is why I volunteer at the zoo and travel to distant locations to see animals in the wild.  So my favorite part of the trip was seeing all the animals, both those that came out of the sea and those that flew to our deck.  So I’m going to end with a slide show of some amazing animals.

Pelican.

This pelican decided to stop and visit with us for a while.

angel shark

An angel shark

Moray eel

A moray eel

Bat fish

Two bat fishes of very different sizes.

Sand dollar

A sand dollar

Hitchhikers

A group of sea birds decide to hitch a ride for a while.

Valerie Bogan: The Adventure Continues: June 12, 2012

NOAA Teacher at Sea
Valerie Bogan
Aboard NOAA ship Oregon II
June 7 – 20, 2012

Mission: Southeast Fisheries Science Center Summer Groundfish (SEAMAP) Survey
Geographical area of cruise: Gulf of Mexico
Date
: Tuesday June 12, 2012

Weather Data from the Bridge:
Sea temperature 28  degrees celsius, Air temperature 26.4 degrees celsius, building seas.

Science and Technology Log

Today I want to discuss the neuston net.  This is a very large net made out of finely woven mesh which is deployed (shoved off the side of the boat) in order to catch plankton.  There are three types of plankton: phytoplankton (plants and algae),  zooplankton (animals), and ichytoplankton (baby fish).  The neuston net rides along the surface of the water for ten minutes scooping up any organisms which are near the surface.  After the ten minutes are up, the deck crew uses a crane to pull the net out of the water and bring it up to the point where someone can wash it down with a hose.  This is necessary because not all of the plankton ends up in the cod end (the place where the collection jar is located) so we have to use a hose to get all of the loose stuff washed into the end of the net.  After the net is washed down, the cod end is carefully removed, placed in a bucket and taken to the stern (back) of the ship where it is processed.

Putting out the neuston net

This is how the neuston net is moved from the ship into the water. From left to right Jeff, Marshall, and Chris are safely deploying the net.

To process the sample you must first empty the contents of the cod end into a filter which will allow the water to run out but will keep the sample.  Then you transfer (move) the sample from the filter into a glass sample jar.  Sometimes the sample smoothly slides into the jar and other times you have to wash down the filter with some ethanol.  Once all of the sample is in the jar it is topped off with ethanol, a tag is placed inside the jar, and another tag is put on top of the jar.  This sample is stored on the boat and taken back to the NOAA lab where it will be cataloged.

Processing the neuston sample

In this picture I am filtering out the water from the neuston sample so it can be placed in a sample jar.(Picture by Francis)

Personal Log

Today is our fifth day at sea and I’m feeling fairly comfortable with my duties on the ship.  I was assigned to the night watch which runs from midnight till noon the next day.  I’ll admit I didn’t make it the entire time the first day. We got done early and despite my intentions to stay up until my shift, I would have ended I falling asleep.  The second night was better. I was beyond exhausted at the end, but I did manage to make it through the entire shift.  At this point my mind and body have adjusted to the shift and I can easily drift to sleep at 3 pm and get up at 11:15 pm.  Students, this is a great example of what it means to be responsible.  If I was given the choice, do you think I would have chosen these crazy hours or to work twelve hours straight?  No of course not but I really wanted to come on this expedition and this work assignment is part of the trip.  So I’m doing the same thing I would expect you to do in a situation like this: accept it and get the work done.

Now I don’t want you to think that the trip is just about hard work. It’s also about seeing new places and getting to know some interesting people.  I started out this trip in Pascagoula Mississippi, a city and state I never planned on visiting before this assignment.  However, the people there were so helpful and friendly that I would gladly go back to see more of this region.  All of you from the Kokomo area know that the major employers are automobile companies. Well, Pascagoula also has a major industry: ship building.  So despite the distance between Kokomo and Pascagoula–about 900 miles–each town depends on an industry for their survival and both towns are incredibly proud of their contribution to society.

Ship yards in Pascagoula

The major industry in Pascagoula is ship building.

I have been introducing you to parts of the ship, and today I’m going to tell you about the bridge.  Now this is not the type of bridge that crosses a river, but rather the command center of the ship.  The crew on the bridge is responsible for the safety of all personal on board and for the ship itself.  There is a vast array of technology on the bridge which the crew uses to plot our course, check the weather, and to do hundreds of other things which are necessary for the ship to function.

Navigation chart

This is the chart the bridge crew uses to plot our course.

Valerie Bogan: June 15, 2012

NOAA Teacher at Sea
Valerie Bogan
Aboard NOAA ship Oregon II
June 7 – 20, 2012

Mission: Southeast Fisheries Science Center Summer Groundfish (SEAMAP) Survey
Geographical area of cruise: Gulf of Mexico
Date
: Friday  June 15, 2012

Weather Data from the Bridge:
Sea temperature 28  degrees celsius, Air temperature 26.4 degrees celsius, calm seas.

Science and Technology Log

The scientific device for this blog entry is called the Bongo net.  This apparatus is actually two nets which are mounted on a metal frame.  Each net has a diameter of 60 cm and is 305 cm long with a cod end which is the narrowest part of the net to catch the plankton (both plants and animals).  At the opening of each net is a flow meter which records the amount of water that passes through the net in liters. This allows the scientists to calculate the total population of each type of plankton without having to collect all the plankton in the area.  This is done by first finding out how many individuals there are of each species in the sample.  Then you calculate the number of liters in the transect (sample area) by multiplying the length of the transect by the width of the transect to find the area in square meters.  To find the volume, you multiply the area by the depth which will give you the amount of water in cubic meters.  Lastly you have to take the volume in cubic meters and convert it to cubic liters.  Now that you have found the amount of water in the transect you are ready to find the number of each species of plankton in that amount of water.  To do this you take the number of individuals in the entire sample and divide it by the amount of liters which flowed through the net during sampling to find the number of the species per liter.  Then you multiply that number by the total amount of liters in the transect which gives you an estimate of how many of that species exist in that part of the Gulf of Mexico.

Bongo nets

In this picture I am helping Jeff bring the Bongo nets back on board the ship. (Picture by Francis Tran)

NOAA personnel aren’t the only scientists on board. There is also a volunteer named Marshall Johnson, who just finished his master’s degree at the University of South Alabama where he was working on a project involving larval fish and what they eat.  He chose to come on this cruise in order to help a fellow student collect samples for her Master’s degree.  Thus far he has been amazed by the vast array of sea life that have shown up in our nets and have been seen swimming around our ship.  He has almost finished his Master’s degree and his dream job would be to captain a charter boat so he can share his love of sea life and fishing with other people.  His advice for middle school students, “Dream big and follow your goals”.

Marshal Johnson

Marshal holding two of his favorite species in the dry lab.

We also have a NOAA intern on board named Francis Tran who is going into his junior year at Mississippi State University where he is studying electrical engineering.  He found out about the internship through his university and applied by submitting an essay and references to the coordinator of the program.  His advice for middle school students, “do something you love, don’t settle”.

Francis Tran

Francis with his favorite animal the brown shrimp.

Personal Log

We have been at sea for one whole week and honestly it is going better than I expected.  I was uncertain if I could live on a ship for this amount of time due to my intense independence.  I’m not used to giving up control of where I am and what I am doing so I feared I would be tempted to jump overboard and start swimming to shore by now.  However I have found that I’m quite content to stay on the ship and am enjoying my time at sea immensely.  However, I do miss my workouts. There is some exercise equipment on board but finding the time to use it is impossible.  I also miss my daily yoga practices but with the ship pitching from side to side unpredictably I’m afraid of giving it a try because it is quite possible I would be doing downward facing dog pose and the ship would pitch me head first into a wall.

In order for a ship to stay at sea for an extended time it must have a well-stocked galley (kitchen) and serve excellent food.  As I have mentioned before, the shifts are long and don’t exactly match up with normal meal times so it is important for the crew to be able to grab a little something in between meals.  For example since my shift starts at midnight I’m hungry for breakfast at about 2 a.m., not the normal breakfast time, but I’m able to pour myself some cereal so that I am working with a full stomach and am able to concentrate on my work.  However, we do have three wonderful meals prepared for us each day.  Paul and Walter are the men who work to make sure the crew and scientists are well taken care of when it comes to mealtimes.

The galley

Alonzo and Chris hanging out in the galley having a little snack.

Dave Grant: The Straits of Florida, March 3, 2012

NOAA Teacher at Sea
Dave Grant
Aboard NOAA Ship Ronald H. Brown
February 15 – March 5, 2012

Mission: Western Boundary Time Series
Geographical Area: Sub-Tropical Atlantic, off the Coast of the Bahamas
Date: March 3, 2012

Weather Data from the Bridge

Position:30 deg 37 min North Latitude & 79 deg 29 min West Longitude
Windspeed: 30 knots
Wind Direction: North
Air Temperature: 14.1 deg C / 57.4 deg F
Water Temperature: 25.6 deg C / 78.4 deg F
Atm Pressure: 1007.2 mb
Water Depth:740 meters / 2428 feet
Cloud Cover: 85%
Cloud Type: Cumulonimbus and Stratus

Science/Technology Log:

Entering the  Gulf Stream and Straits of Florida

“There is in the world no other such majestic flow of waters.
Its current is more rapid than the Mississippi or the Amazon.
Its waters, as far out from the Gulf as the Carolina coasts, are of an indigo blue.
They are so distinctly marked that their line of junction with the common sea-water
may be traced by the eye.”

Matthew Maury – The Physical Geography of the Sea

 While our cruise could hardly be called leisurely, most sampling has been spread out between sites, sometimes involving day-long periods on station while the CTD and moorings are recovered from great depths (5,000 meters). However, Chief Scientist Dr. Baringer regularly reminds us that west of the Bahamas in the Gulf Stream transect, our stations are in much shallower water (≤800 meters) and close together (The Florida Straits are only about 50 miles wide), so we should anticipate increased activity on deck and in the lab. In addition to the hydrology measurements, we will deploy a specialized net to sample those minute creatures that live at the surface film of the water – the neuston.

The Neuston net is deployed for a 10-minute tow.

The Neuston net is deployed for a 10-minute tow.

Now that we have crossed the Bahama Banks and are on-station, the routine is, as expected, very condensed, and there is little time to rest. What I did not anticipate was the great flow of the Gulf Stream and the challenge to the crew to keep the Brown on our East-West transect line as the current forces us north.  Additionally, as Wordsworth wrote, “with ships the sea was sprinkled far and wide”  and  we had to avoid many other craft, including another research ship sampling in the same area.

Ben Franklin is famous for having produced the first chart of this great Western Boundary Current, but naval officer Matthew Maury – America’s Scientist of the Sea – and author of what is recognized as the first oceanography text, best described it.  Remarkably, in The Physical Geography of the Sea, first published in 1855, he anticipates the significance of this major climate study project and summarizes it in a short and often-quoted paragraph:

“There is a river in the ocean. In the severest of droughts it never fails,
and in the mightiest floods it never overflows.
Its banks and its bottom are of cold water, while its current is of warm.
The Gulf of Mexico is its fountain, and its mouth is the Arctic seas.
It is the Gulf Stream.”

 

Gulf Stream water

CTD data from the Straits of Florida
1. Note that temperature (Red) decreases steadily with depth from about 26-degrees C at the surface,
to less than 10-degrees C at 700 meters. (Most of the ocean’s waters are cool where not warmed by sunlight).
2. Dissolved Oxygen (Green) varies considerably from a maximum at the surface, with a sharp decline at about 100 meters, and a more gradual decline to about 700 meters. (Phytoplankton in surface water produce excess oxygen through photosynthesis during daylight hours. At night and below about 100 meters, respiration predominates and organisms reduce the level of dissolved oxygen.)
3. Salinity (Blue) is related to atmospheric processes (Precipitation and Evaporation) and also varies according to depth, being saltiest at about 150 meters.

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“Ron Brown: Phone Home!”

At Midnight, just within sight of the beam of the Jupiter Inlet Lighthouse (And to the relief of the home-sick sailors on board – “Finally -  after  more than two weeks, we are within the range of cell phone towers!”) we began our studies of the Straits of Florida and the Gulf Stream. Nine stations in rapid order – standing-by for a CTD cast, and then turning into the current to set the neuston net for a ten-minute tow.

The purpose of the net is to sample creatures that live on or visit the interface between air and water, so the mouth of the net is only half submerged. Neuston comes from the Greek for swimming and in warm waters a variety of invertebrates and even some young mesopelagic fishes rise within a few centimeters of the surface at night to filter phytoplankton and bacteria, and feed upon other zooplankton and even drowned terrestrial insects that have been blown out to sea.

On the upper side of this water/atmosphere interface, a smaller variety of floating invertebrates, notably Physalia  and Velella (Portuguese man-of-war and By-the-wind-sailor) use gas-filled buoyancy chambers or surface tension to ride the winds and currents. This much smaller group of seafarers is further classified by oceanographers as Pleuston.

Prior to this cruise, my experience with such a sampling device was limited – Years ago, spending miserable nights sailing in choppy seas off of Sandy Hook, NJ searching  for fishes eggs and larva rising to the surface after dark; and later, much more enjoyable times studying water striders – peculiar insects that spend their lives utilizing surface tension to skate along the surface of Cape Cod ponds.

Our CTD and net casts are complicated by rising winds and chop, but some great samples were retrieved. Once the net is recovered, we rinse it down with the seawater hose, collect everything from the bottle at the cod end, rinse off and separate the great mass of weed (Sargassum) and pickle the neuston in bottles of alcohol for analysis back at the lab.

Midnight shift: Recovering the net by moonlight.

Midnight shift: Recovering the net by moonlight.

Midnight shift: Recovering the net by moonlight.

Midnight shift: Recovering the net by moonlight.

Since much of the zooplankton community rises closer to the surface at night where phytoplankton is more concentrated and the chances of being preyed upon are slimmer, there are some noticeable differences in the samples taken then and during daylight hours. Unavoidably, both samples contain great quantities of Sargassum but the weed-colored carapaces of the different crustaceans are a clue to which specimens are from the Sargassum community and which are not.

Gulfweed Shrimp - Latreutes

Gulfweed Shrimp – Latreutes

We hit the jackpot early; snaring a variety of invertebrates and fishes, including the extraordinarily well-camouflaged Sargassum fish – a piscatorial phenomenon I’ve hoped to see ever since I was a kid reading William Beebe’s classic The Arcturus Adventure. What a tenuous existence for such a vulnerable and weak swimmer, hugging the Sargassum as it is dashed about in the waves. Even with its weed-like disguise and ability to blend in with the plants, it must lead a challenging life.

A unique member of the otherwise bottom-dwelling frogfishes, the Histrio histrio has smooth skin, and spends its life hitch-hiking along in the gulf-weed forest. Like other members of the family Antennariidae, it is an ambush predator, luring other creatures to their doom by angling with its fleshy fins.

The Sargassum fish (Histrio)

The Sargassum fish (Histrio)

Needlefish and Sargassum fish

Needlefish and Sargassum fish

Another highlight for me is the water striders we found in several samples. These “true bugs” (Hemiptera) are remarkable for several reasons. Most varieties of these “pond-skaters” (Or Jesus Bugs if you are from Texas) are found on calm freshwater lakes and streams, but a few members of this family (Gerridae) are the only true marine insects – representing a tentative Arthropod reinvasion of the sea after their splendid foray onto land hundreds of millions of years ago.

Two great finds: Sygnathus pelagicus– A Sargassum pipefish – a cousin of the sea horse. Halobates – the water strider. An example of the Pleuston community.

Two great finds:
Sygnathus pelagicus– A Sargassum pipefish – a cousin of the sea horse.
Halobates – the water strider. An example of the Pleuston community.

Using surface tension to their advantage, they “skate” along by flicking their middle and hind legs, and can even “communicate” with each other by vibrating the surface of the water with the hair-like setae on their feet. On lakes their prey is other insects like mosquito larvae, confined to the surface. How they manage to find food and communicate at the surface of the raging sea is a mystery, but whatever the means, they are adept at it, and we recovered them in half of the samples.

The ocean's insect: The  remarkable water stride

The ocean’s insect: The remarkable water stride

The scientists who provided the net are generally more interested in ichthyoplankton to monitor fish eggs and larvae to predict population trends, and monitor impacts like oil spills; so this is why samples are preserved to return to the lab in Miami.

Before packing up things after our marathon sampling spree I was able to examine our catch and observed a few things:
1. I am the “High-Hook” on the cruise – catching far more fishes (albeit tiny ones) than the rest of the crew with their fishing poles. (Needlefish, sargassum fish, pipe fish, filefish and several larval species)
2. Depending on the time of day the samples were taken, there is a marked difference in the quantity and composition of organisms that have separated from the Sargassum and settled in the sample jars – (Noticeably more at night than during daylight hours).
3. There appears to be a greater variety of sea grasses present (Turtle grass, etc.) on the eastern (Bahamas side) of the Straits. We observed one seabean - drift seeds and fruits (or disseminules) from terrestrial plants.
4. Plastic bits are present in all samples – particularly plastic ties (Table 1.)

Settled organisms in sample jars.

Settled organisms in sample jars.

Sargassum fauna: Portunid crab – with eggs on her belly.
(Portunus was a Roman god - Protector of harbors and gates,
who supposedly also invented navigation)

Belly view of a Caridean shrimp

Belly view of a Caridean shrimp

A tiny fish egg ready to hatch!

A tiny fish egg ready to hatch!

A larval fish begins its perilous journey in the Gulf Stream.

A larval fish begins its perilous journey in the Gulf Stream.

Site/Local time

Notable Contents*

Biomass Site Depth
8 Day 17:48 Weed, Grasses(3 spp) 3.0 mm 79˚12’ 485 m
7 Day 16:10 Grasses(4 spp) 2.0 mm 79˚17’ 616 m
6 Day 14:30 Grasses(2 spp) Fish eggs and larva Trace 79˚22’ 708 m
5 Day 12:45 Water striders, Grass (1 spp) Trace 79˚30’ 759 m
4 Day 10:13 Crustacean larva, shrimp (large), 7.0 mm 79˚36’ 646 m
3 Dawn 07:53 Crustacean larva, shrimp (large), water striders Trace 79˚41’ 543 m
2 Night 05:10 Crustacean larva, shrimp (small), Pipefish, water striders 7.0 mm 79˚46’ 388 m
1 Night 02:48 Crustacean larva, shrimp, needlefish, Sargassum fish, Herring(?), Portunid crabs, shrimp (large), Copepods 13 mm 79˚51’ 264 m
0 Night 00:37 Crustacean larva, shrimp, Copepods 25 mm 79˚56’ 148 m

*Plastic bits and Sargassum weed and its endemic epibionts are present in all samples.

Table 1.   Contents in sample jars.

There is a marked difference in the quantity and composition of organisms collected at night (Left).

There is a marked difference in the quantity and composition of organisms collected at night (Left).

There is a marked difference in the quantity and composition of organisms collected at night (Left) and during the day (Right).

There is a marked difference in the quantity and composition of organisms collected during the day (Right).

With sampling completed we steer north to ride the Gulf Stream towards the Brown’s home-port,  and turn away from the bright lights of Florida …

“Where the spent lights quiver and gleam;
Where the salt weed sways in the stream;
Where the sea-beasts rang’d all around
Feed in the ooze of their pasture ground:”

Matthew Arnold

"Red sky at morning...sailor take warning!"

“Red sky at morning…sailor take warning!”

Homeward bound:

A storm battering the Midwest will impede our progress back north to Charleston and threatens to bring us the only foul weather of the cruise. Note the location of the cold front over the Florida Straits.

“Now the great winds shoreward blow;
Now the salt tides seaward flow;
Now the wild white horses play,
Champ and chafe and toss the spray.”
Matthew Arnold

As the sailors say: "The sheep are grazing." A gale is brewing and kicking up whitecaps as we sail north to Charleston.

As the sailors say: “The sheep are grazing.”
A gale is brewing and kicking up whitecaps as we sail north to Charleston.

Dave Grant: The “River in the Ocean”, March 2, 2012

NOAA Teacher at Sea
Dave Grant
Aboard NOAA Ship Ronald H. Brown
February 15 – March 5, 2012

Mission: Western Boundary Time Series
Geographical Area: Sub-Tropical Atlantic, off the Coast of the Bahamas
Date: March 2, 2012

Weather Data from the Bridge

Position: 26 degrees 19 minutes North Latitude & 79 degrees 55 minutes West Longitude
Windspeed: 14 knots
Wind Direction: South
Air Temperature: 25.4 deg C / 77.7 deg F
Water Temperature: 26.1 deg C / 79 deg F
Atm Pressure: 1014.7 mb
Water Depth: 242 m / 794 feet
Cloud Cover: none
Cloud Type: NA

“The moment one gives close attention to anything, even a blade of grass,
it becomes a mysterious, awesome, indescribably magnificent world in itself.”

Henry Miller

My evenings looking through the microscope are a short course in invertebrate zoology. Every drop of water filtered through the plankton net reveals new and mystifying creatures. Perhaps 90% of marine invertebrates, like newly hatched mollusks and crustaceans, spend part of their life in a drifting stage – meroplankton; as opposed to holoplankton – organisms that are planktonic throughout their life cycle.

MOLLUSK LARVAE

Bivalve

Bivalve

 Univalve

Univalve

The lucky individuals that escape being eaten, and are near a suitable substrate at the right moment, settle out into a sedentary life far from their place of origin. For the long distance travelers swept up in the Gulf Stream, the most fortunate waifs of the sea that survive long enough might make it all the way to Bermuda. The only hope for the remainder is to attach to a piece of flotsam or jetsam, or an unnatural and unlikely refuge like the electronic picket fence of moorings the Ron Brown is servicing east of the Bahamas.

“The gaudy, babbling, and remorseful day,
Is crept into the bosom of the sea.”
Shakespeare

A league and a half* of cable, sensors and a ton of anchor chain are wrestled on deck during a day-long operation in the tropical heat. (*A mariner’s league equals three nautical miles or 3041 fathoms [18,246 feet])

It is easy to be humbled by the immensity of the sea and the scope of the mooring project while observing miles of cable and buoys stretched towards the horizon, about to be set in place with a ton of anchor chain gingerly swung off the stern for its half-hour trip to the bosom of the sea.

Thanks to the hard labor and alert eyes of our British and French (“And Irish”) colleagues retrieving and deploying the attached temperature and salinity sensors, I am regularly directed to investigate “something crawling out of the gear” or to photograph bite marks from deep sea denizens on very expensive, but sturdy equipment.

A retrieved sensor with bite marks.

A retrieved sensor with bite marks.

To my surprise, other than teeth marks, very little evidence of marine life is present on the miles of lines and devices strung deeper than about 200 meters. This may be due in part to the materials of which they are constructed and protective coatings to prevent bio-fouling, but sunlight or more precisely, the attenuation of it as one goes deeper, is probably the most important factor.

Fireworm (Drawings and images by Dave Grant - NOAA Ron Brown)

Fireworm
(Drawings and images by Dave Grant – NOAA Ron Brown)

Handle with care! Close-up of worm spines

Handle with care! Close-up of worm spines

The first discovery I was directed to was a striking red bristle worm wiggling out of the crevice in a buoy.  It appears to be one of the reef-dwelling Amphinomids – the aptly-named fireworms that SCUBA divers in the Caribbean avoid because of their venomous spines; so I was cautious when handling it.  This proved to be the deepest-dwelling organism we found, along with some minute growths of stony and soft corals.

Five o’clock shadow” on a buoy – A year’s growth of fouling organisms – only an inch tall.

On shallower buoys and equipment, there are sparse growths of brown and blue-green algae, small numbers of goose barnacles, tiny coiled limey tubes of Serpulid worms like the Spirobis found on the floating gulfweed, some non-descript bivalves (Anomia?) covered with other fouling growth, skeleton shrimp creeping like inch-worms, and of course the ubiquitous Bryozoans. Searching through this depauperate community not as challenging as the plankton samples, but not surprising since our distance from land, reefs or upwelling areas – and especially clear water and lack of seabirds and fishes; are all indicators that this is a nutrient-deficient, less productive part of the ocean.

   

Bio-fouling - “on the half-shell.”                       Skeleton shrimp (Caprellidae)

The Ron Brown is the largest workhorse in the NOAA fleet and its labs and decks are intentionally cleared of equipment between cruises so that visiting scientists can bring aboard their own gear that is best suited to their specific project needs. NOAA’s physical oceanographers from Miami arrived with a truckload of crates holding Niskin water sampling bottles for the CTD and their chemistry equipment for DO (Dissolved Oxygen) and salinity measurements; and in a large shipping container (“Ship-tainer”) from England, the British and French (“and Irish”) scientists transported their own remote sensing gear, buoys, and (quite literally) tons of massive chain and cables to anchor their moorings. (I am surprised to learn from the “Brits” that the heavy chain is shipped all the way from England because it is increasingly hard to acquire. )

In the lab: Scores of sensors serviced and ready for deployment

In the lab: Scores of sensors serviced and ready for deployment

This is how most science is facilitated on the Brown and it requires many months of planning and pre-positioning of materials. I am lucky and can travel light – and with little advanced preparation. I am using simple methods to obtain plankton samples and images via a small portable microscope, digital camera and plankton net which I can cram into my backpack for any trips that involve large bodies of water. The little Swift* scope has three lens (4x, 10x, 40x) with a 10x ocular, and I get great resolution at 40x, and can get decent resolution to 100x. Using tips from Dave Bulloch (Handbook for the Marine Naturalist) I am able to push that somewhat with a simple Nikon Coolpix* point-and-shoot camera – but lose some of the sharpness with digital zoom.  As you might suspect, the ship’s movement and engine vibration can be a challenge when peering through the scope, but is satisfactory for some preliminary identification. (*These are not commercial endorsements, but I can be bought if either company is willing to fund my next cruise!)

PHYTOPLANKTON

Centric diatom - Coscinodiscus

Centric diatom – Coscinodiscus

    

Dinoflagellates -  Different Ceratium species

ZOOPLANKTON

A Plankton précis

Collecting specimens would be much more difficult without the cooperation of the Brown’s crew and visiting scientists, and their assistance is always reliable and appreciated. The least effective method of collection has been by filtering the deep, cold bottom water brought up in the Niskin bottles. As mentioned earlier, no live specimens were recovered; only fragments of diatom and Silicoflagellate skeletons surviving the slow drift to the bottom, which I have been able to identify through deep sea core images posted at the Consortium for Ocean Leadership website.

Needless to say, the most indiscriminate method of collection and the most material collected is through the large neuston net. The greatest biomass observed on the trip is the millions of tons of Sargassum weed, which covers the surface in great slacks around us that are even visible in satellite images.

Although the continuous flow of ocean water pumped into the wet lab and through my plankton net is effective and the most convenient collection method, the most surprising finds are from the saltwater intake screens that the engineer directed me to. This includes bizarre crystal-clear, inch-long, and paper-thin Phylosoma – larvae of tropical lobsters – that I initially mistook for pieces of plastic.

Inch-long Phylosoma larvae on a glass slide. (One of the tropical lobsters.)

Inch-long Phylosoma larvae on a glass slide. (One of the tropical lobsters.)

“All the ingenious men, and all the scientific men, and all the fanciful men in the world …
…could never invent anything so curious and so ridiculous, as a lobster.”

Charles Kingsley -The Water-Babies

Plankton communities are noticeably different between the Gulf Stream, inshore, and offshore in the pelagic waters east of the Bahamas.  Near the coast, either the shallower Bahama Banks or the neritic waters over the continental shelf closer to Charleston, the plankton is larger, more familiar to me and less challenging to sort, including: copepods, mollusk larvae and diatoms. Steaming over the shelf waters at night, the ship’s wake is often phosphorescent, and dinoflagellates, including the “night-light” Noctiluca are common in those samples.

Dinoflagellate - Noctiluca

Dinoflagellate – Noctiluca

 The waters east of the Bahamas along the transect line are notable for their zooplankton, including great numbers and varieties of Foraminifera, and some striking amphipod shrimp. Compared to cooler waters I am familiar with, subtropical waters here have over a dozen species of Forams, and some astonishingly colorful shrimp that come up nightly from deeper water.

It’s not all work and no play on the Ron Brown, and there are entertaining moments like decorating foam cups with school logos to send down with the CTD to document the extreme pressure at the bottom. Brought back to class, these graphically illustrate to younger students the challenges of deep sea research.

Foam cup:  Before-and-after a trip to 5,000 meters

Foam cup: Before-and-after a trip to 5,000 meters

Navigating by Dead-reckoning

On calm days while we are being held on-station by the Brown’s powerful thrusters, I can measure current speeds using Sargassum clumps as Dutchman’s logs as they drift by. Long before modern navigation devices, sailors would have to use dead-reckoning techniques to estimate their progress.  One method used a float attached to a measured spool of knotted line (A log-line), trailing behind the moving vessel. The navigator counted the number of knots that passed through his hands as the line played out behind the ship to estimate the vessel’s speed (in knots). Since nothing is to be tossed off the Brown, I rely on a simpler method by following the progress of the Sargassum as it drifts by stem-to-stern while we are stationary at our sampling site. Since I know the length of the Brown at the waterline (~100-meters), I can estimate current speed by observing drifting Sargassum.

Watching sargassum, I wonder if a swimmer could keep pace with the currents in these waters. When in college
my brothers and would strive to cover a 100-meter race by swimming it in under a minute. Here is the data from east of the Bahamas. See if you can determine the current speed there and if a good swimmer could keep pace.

ESTIMATING CURRENT SPEED

Data on currents:
Average of three measurements of Sargassum drifting  the length of the Ron Brown = 245 seconds.
Length of the Ron Brown – 100-meters.

1. How many meters per second is the current east of the Bahamas?
2. As a swimmer in college – with my best time in the 100-meters freestyle of one minute – could I have kept up with the Ron Brown… or been swept away towards the Bahamas?

For more on currents, visit my site at the college:
http://ux.brookdalecc.edu/staff/sandyhook/Student%20Page%201/TUTS-2-09-1/Index.html

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Other navigational exercises I try to include determining Latitude and Longitude. Latitude is easy as long as you can shoot the sun at midday or find the altitude of Polaris in the night sky; and sailors have done that for centuries. The ship’s navigator will get out the sextant for this, or, since the width of one’s fist is about 10-degrees of sky, I can estimate the height of both of these navigational beacons by counting the number of fists between the star and the horizon.

ESTIMATING LATITUDE

Data:
Night observation (Shooting the North Star) - Number of Fists from the Northern horizon to Polaris = 3
Day observation (Shooting the Sun) – Number of Fists from the Southern horizon to the Sun = 5.5

If the width of a fist is equal to about 10-degrees of horizon, our estimate of Latitude using Polaris is 30-degrees (3 x 10).
Not too bad an estimate on a rocking ship at night, compared to our actual location (See Data from the Bridge at the top.).

Shooting the Sun at its Zenith at 12:30 that day gives us its altitude as 55-degrees - which seems too high unless we consider the earth’s tilt (23.5-degrees). So if we deduct that (55 – 23.5) we get 31.5, which is closer to our actual position. And if we consult an Almanac, we know that the sun is still about six degrees below the Equator on its seasonal trip North; so by deducting that (31.5 – 6) we end up with an estimate of 25.5-degrees. This is an even better estimate of our Latitude.

Here is the dreaded word problem:

By shooting the Sun, our best estimate of Latitude is 25.5 degrees (25 degrees/30 minutes)
The actual Latitude of the ship using GPS is 26-degrees/19 minutes.
If there are 60 minutes to a degree of Latitude – each of those minutes representing a Nautical Mile – how many Nautical Miles off course does our estimate place us on the featureless sea?

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Longitude is much harder to determine if you don’t have an accurate timepiece to compare local time with universal time (The time at Greenwich, England), and an accurate ship’s chronometer wasn’t in use until the mid-1700’s.
To understand the challenge of designing a precise timepiece that reliably will function at sea, I used two crucial clock mechanisms:  a pendulum and a spring. Finding a spring was easy, since “Doc” had a scale at Sick Bay. For the pendulum I fashioned a small weight swinging on a string)

Using the scale to observe the ship’s motion.

Using the scale to observe the ship’s motion.

Standing on the scale and swinging the pendulum even in calm weather quickly demonstrated three things:

First: I have developed my sea legs, and no longer notice the regular motion of the ship.
Second: Even when the sea feels calm, the scale’s spring mechanism swings back and forth under my weight; adding and deducting 20 pounds to my real weight and reflecting the ship’s rocking that I no longer notice.
Three: On rough days, even if I can hold still, the ship’s heaving, pitching and rolling alters my pendulum’s reliable swing – its movements reflecting the ship’s indicator in the lab. Experimenting helps me appreciate clock-maker John Harrison, and his massive, 65-pound No. 1 Ship’s Chronometer  he presented to the Royal Navy in 1728.

Ship movement as recorded by the computer

Ship movement as recorded by the computer

Doc: Always on duty -  Sick Bay on the Ron Brown

Doc: Always on duty – Sick Bay on the Ron Brown

Besides having very well-provisioned Sick Bays, NOAA ships have experienced and very competent medical officers.  Our “Doc” received his training at Yale, and served as a medic during the Gulf War.

Especially alert to anyone who exhibits even the mildest symptoms of sea-sickness, Christian is available 24-hours for emergencies – and in spite of the crew constantly wrestling with heavy equipment on a rocking deck, we’ve only experienced a few minor bumps and bruises. He has regular office hours every day, and is constantly on the move around the ship when not on duty there.

Besides keeping us healthy, he helps keep the ship humming by testing the drinking water supply (The Brown desalinates seawater when underway, but takes on local water while in port); surveys all departments for safety issues; and with the Captain, has the final word if-or-when a cruise is to be terminated if there is a medical emergency.

Since a storm pounding the Midwest will head out to sea and cross our path when we head north to Charleston, he is reminding everyone that remedies for sea sickness are always available at his office door, and thanks to NASA and the space program, if the motion sickness pills don’t work, he has available stronger medicine. So far we have been blessed with relatively calm weather and a resilient crew.

                          The warm  (Red) Gulf Stream waters viewed from a satellite iamge.

The warm (Red) Gulf Stream waters viewed from a satellite image.

 Contact: The edge of the Gulf Stream - Matthew Maury’s  River in the Ocean

Contact: The edge of the Gulf Stream – Matthew Maury’s River in the Ocean

Birdwatching on the Ron Brown

For the time being I take advantage of the calm seas to scrutinize what’s under the microscope, and when on break, look for seabirds. East of the Bahamas, as anticipated after consulting ornithologist Poul Jespersen’s map of Atlantic bird sightings, I only spotted two birds over a two-week stretch at sea (storm petrels). This is very much in contrast to the dozens of species and hundreds of seabirds spotted in the rich waters of the Humboldt Current off of Chile , where I joined the Brown in 2008.
(http://ux.brookdalecc.edu/staff/Web%2012-2-04/seabirds/Brown%20terns%202/Terns%20%20fixed/SEPacific.html)

Passing through Bahamian waters was no more rewarding, but now that we are west and in the Florida Straits there are several species of gulls during the day, and at night more storm petrels startled by the ship’s lights. One windy night a large disoriented bird (Shearwater?) suddenly fluttered out of the dark and brushed my head before bumping a deck light and careening back out into the darkness. Throughout the day a cohort of terns has taken up watch on the forward mast of the Brown and noisily, they juggle for the best positions at the bow – resting until the ship flushes a school of flying fishes, and then swooping down across the water trying and snatch one in mid-air.  Like most fishermen, they are successful only about 10% of the time.

Royal tern "on station" at the jack mast.

Caspian tern “on station” at the jack mast.

Royal tern "on station" at the jack mast.

Royal tern “on station” at the jack mast.

  

*************************************

Despite the dreary forecast from the Captain, Wes and I are enthusiastic about all we have done on the cruise and formulated a list of why NOAA’s Teacher At Sea program is so rewarding.

Top Ten Reasons:
Why be a Teacher At Sea?

10. Fun and excitement exploring the oceans!

9. Meeting dedicated and diligent scientists and crew from around the world!

8. Bragging rights in the Teachers’ Room – and endless anecdotes!

7. Cool NOAA t-shirts, pins and hats from the Ship’s Store!

6. Great meals, three times a day…and FREE laundry!

5. Amazing sunsets, sunrises and star-watches!

4. Reporting on BIG science to students…and in real-time!

3. Outstanding and relevant knowledge brought back to students and colleagues!

2. First-hand experience that relates to your students’ career objectives!

1. Rewarding hours in the lab and fieldremembering why you love science and sharing it with students!

Powerpoint:
Shots from the deck and under the microscope

(Drawings and images by Dave Grant – NOAA Ron Brown)

Dave Grant: Horse Latitudes, February 22, 2012


NOAA Teacher at Sea

Dave Grant
Aboard NOAA Ship Ronald H. Brown
February 15 – March 5, 2012

Mission: Western Boundary Time Series
Geographical Area: Sub-Tropical Atlantic, off the Coast of the Bahamas
Date: February 22, 2012

Weather Data from the Bridge

Position:26.30 N – 75.42 W
Windspeed: 0
Wind Direction: Calm
Air Temperature: 29 C
Water Temperature: 24 C
Atm Pressure: 1025
Water Depth: 4,410 meters
Cloud Cover: 0
Cloud Type: Slight haze

Science/Technology Log:

We are becalmed and even the veteran sailors onboard are remarking on how flat the sea has become. At about 30 degrees North and South Latitude, moist, low pressure air that was heated and lifted from the surface at the Equator has cooled and is now plunging back down to Earth, forming a line of light winds in a band across the sea. This dry, high pressure air becomes the Trade winds as it is drawn back towards the Equator along the sea surface in what is called a Hadley Cell (After its discoverer). We seem to be on the edge of this meteorological milepost, which was more than a nuisance in the days of sail. If stranded in its pattern too long, food and especially drinking water became an issue, and the first to suffer would be animals being transported from the Old World to the New. Legend has it that subsequent voyagers would come across their carcasses…hence the name Horse Latitudes.

While observing ships returning to port near his home, sixteen year-old future rock star Jim Morrison (The DOORS)  composed what is perhaps his most eerie ballot - Horse Latitudes.

“When the still sea conspires an armor
And her sullen and aborted
Currents breed tiny monsters
True sailing is dead
Awkward instant
And the first animal is jettisoned
Legs furiously pumping”

However, the stable ship makes deck work easier and I am catching up on samples under the microscope, including some of my own tiny “monsters” that the currents have bred.

It is the astonishing variety of life that makes the sea such a fascinating
hunting ground. Get a tow-net, dredge and simple microscope,
and a new world is yours – a world of endless surprises.”

(Sir Alister Hardy)

The chief survey technician set me up  with his  flow-through seawater system and I can leave a net under it to continuously gather plankton. I have noticed some patterns already.
One: Phytoplankton is scarce compared to temperate waters off of New Jersey, and this helps account for the clarity and
brilliant blue color of the water. The absence of large rivers here adding nutrients to the system, and little coastal
upwelling,  means that there is little to fertilize plantlife.
Two: More accumulates in the nets at night, confirming that Zooplankton rises to the surface at in the dark. This diurnal
pattern of the plankton community has been well documented ever since biologists and fishermen went to sea.
Three: Also, there is much more plankton at the surface than in deeper water. This is no surprise since sunlight is the
key ingredient at the surface of this ocean ecosystem.
Four: Creatures from offshore tend to have a more feathery look about them than inshore species. This added surface
area may use the turbulence to help support them near the surface  and increase their buoyancy.

It is said:  “Turn off the sun, and the oceans will starve to death in a week.”  It is assumed that among other stresses on the Biosphere that accompany disastrous impacts of large asteroids, dust and ash from these rare collisions block out enough sunlight to stifle photosynthesis, causing Phytoplankton (The “Pasture of the Sea”) to waste away, and setting the stage for the collapse of the Food Chain and mass extinction events. Fortunately we have plenty of brilliant sunshine here and no celestial catastrophes on the horizon.

Some of the most interesting Zooplankton are the Pteropods, the Sea Butterflies.

   
Empty shell and live pteropod specimen
(Images on the Ron Brown by Dave Grant)

The renowned oceanographer Alister Hardy used them as indicators of different water masses flowing around the British Isles; and New England’s great oceanographer, Alfred Redfield correlated their drifting with the anti-clockwise circulation of water in the Gulf of Maine. Although most are small and less than an inch long, they feed on a variety of creatures and in turn become food for many others. In surface waters they gather phytoplankton, some utilizing cilia and mucus to sweep food to the mouth; but in deeper waters, others are carnivorous.

I am informed by our English colleagues that on Europe’s fishing grounds, they are sometimes fed upon by herring, cod and haddock; which is bad news for British fishermen, whose catch rapidly decays and is not marketable. Such fish are referred to as “black gut” or “stinkers.”

How concentrated are pteropods? Whales and seabirds that we hope to encounter later in the cruise are sustained by them, and in the warmer waters of the Atlantic, at relatively shallow depths and on the tops of submerged peaks at around 2,000 meters, R.S. Wimpenny reports considerable deposits of “pteropod ooze” from their descending shells, covering an estimated 1,500,000 square kilometers of the bottom of the Atlantic (An area the size of the Gulf of Mexico.). Like the Foraminifera, in deeper waters the aragonite in their shells (a more soluble form of calcium carbonate) dissolves, and other sediments like silicates from diatoms accumulate instead. Check out any oceanography text and you are likely to find a picture of this biogenic pteropod mud, as well as other types of deposits.

At least 90% of the animals in the ocean are meroplankton – spending time in this itinerant stage before becoming adults. This phase may vary from a few days to over a year, depending on the creature. (European eels larva are the long distance champions; for over a year, drifting from below us in their Sargasso Sea breeding grounds, all the way to rivers in Britain and France.)

Drifting larvae are cheap insurance for a species, filling the surrounding habitat with individuals of your own kind, settling in new areas and expanding ranges, and particularly, not lingering around their birthplace and competing with the parent stock. However, most individuals simply end up as food for other creatures that are higher on the food chain.

Not surprising, there are copepods, the “cattle of the sea” grazing on smaller organisms.

  
(Images on the Ron Brown by Dave Grant)

Calanus finmarchicus is sometimes called the most abundant animal in the world and is found throughout the oceans, sustaining many types of marinelife; even right whales and basking sharks off the coast of New England.

Other sea soup and children of the sea that author David Bulloch likes to call them, drift by me and swim circuits trapped by surface tension in the water drop under the microscope.

  
Radiolaria are single cell Protozoa that not only ensnare food with mucous, but harbor mutualistic algae
among their spines. (100 x’s)


More live pelagic snails. (Pteropod means winged foot.)

  
An empty shell with  copepod sheltered inside. Other skeletons filled with Paramecia, and a mixed sample of shells
and dust particles.  (Images on the Ron Brown by Dave Grant)

Now that is calm, everyone seems to have their sea legs and are comfortable talking about their bouts of mal de mer.
Here is the worst story about sea sickness I have come across:

 From Dave Grant’s collection of sea stories:
The world’s worst tale of seasickness.
As told by Ulysses S. Grant in his Memoirs

One amusing circumstance occurred while we were lying at anchor in Panama Bay. In the regiment there was a Lieutenant Slaughter who was very liable to seasickness. It almost made him sick to see the wave of a table-cloth when the servants were spreading it. Soon after his graduation [from West Point] Slaughter was ordered to California and took passage by a sailing vessel going around Cape Horn. The vessel was seven months making the voyage, and Slaughter was sick every moment of the time, never more so than while lying at anchor after reaching his place of destination. On landing in California he found orders that had come by way of the Isthmus [Panama], notifying him of a mistake in his assignment; he should have been ordered to the northern lakes. He started back by the Isthmus route and was sick all the way. But when he arrived back East he was again ordered to California, this time definitely, and at this date was making his third trip. He was sick as ever, and had been so for more than a month while lying at anchor in the bay. I remember him well, seated with his elbows on the table in front of him, his chin between his hands, and looking the picture of despair. At last he broke out, “I wish I had taken my father’s advice; he wanted me to go into the navy; if I had done so, I should not have had to go to sea so much.”

Poor Slaughter! It was his last sea voyage. He was killed by Indians in Oregon.

Dave Grant: Going “Blue Water”
, February 17, 2012

NOAA Teacher at Sea
Dave Grant
Aboard NOAA Ship Ronald H. Brown
February 15 – March 5, 2012

Mission: Western Boundary Time Series
Geographical Area: Sub-Tropical Atlantic, off the Coast of the Bahamas
Date: February 17, 2012

Weather Data from the Bridge

Position: Windspeed: 15 knots
Wind Direction: South/Southeast
Air Temperature: 23.9 deg C/75 deg F
Water Temperature: 24.5 deg C/76 deg F
Atm Pressure: 1016.23 mb
Water Depth: 4625 meters/15,174 feet
Cloud Cover: less than 20%
Cloud Type: Cumulus

Science/Technology Log

Sailors used to describe their trips as short-haul or coastal,
or “long seas” which also was described as going “Blue Water”


We are off to a great start after passing the harbor lighthouse and breakwater, and the seas are calm and winds gentle. The Low Country and barrier islands of South Carolina disappear quickly over the horizon, and the most striking change for me is the color of the water. As we have transited from the sediment rich waters upriver, to the estuary, and out to the ocean, its color has gone from grayish, to green to blue.

Bay/Estuary water in Charleston

Gulf Stream water

As a rapid indicator of what’s going on within it biologically, oceanographers use the color of the water. To quantify their observations for other scientist to compare results, a white secchi disc is lowered just below the surface and the observer compares the ocean’s color with tinted water in a series of small vials – the Forel-Ule Scale. (Francois Forel was an oceanographer and his end of the scale is the bluest; and Willi Ule was a limnologist and his end of the scale is darker, reflecting the fresh waters he studied.) The 21 colors run the gambit of colors found in natural waters and modified by the plankton community and range from brownish-to-green-to-blue. This gives you a quick measure of productivity of the waters and the types of phytoplankton predominating. For example: Diatom blooms are brownish and Dinoflagellate blooms form the notorious red tides. Clear, less productive waters look blue, and we are sailing into waters that are a deeper blue with every league we sail.

I lack a secchi disk and we can’t stop the ship to lower one anyway, so I am using instead a scupper on the side as a photographic frame to document this well-studied and interesting phenomenon.

“Being on a boat that’s moving through the water, it’s so clear.
Everything falls into place in terms of what’s important, and what’s not.”
(James Taylor)

Before departing on the trip I came across Richard Pough’s bird map of the Atlantic. On it he divides the ocean into 10-degree quadrants and indicates the average water temperature and number of birds he sighted daily. The good news is we are heading southeast into warmer waters. The bad news is, he does not indicate a very productive hunting ground for bird watching. For example, Cape Hatteras, NC, where the Gulf Stream skirts North Carolina, shows 40 birds. Off the highly productive sub-polar regions like Iceland where there are great breeding colonies of seabirds like gannets, he indicates scores of birds. Regardless, I am hopeful we will find some true seabirds to photograph on our voyage; and perhaps have some migrating songbirds drop in for a rest.

Gulf Stream sunset

Today, as our colleague Wes Struble discusses on his blog, we retrieved our first samples with the CTD rosette. Water is retrieved from predetermined levels between the surface and 4,500 meters sealed in bottles for salinity and dissolved oxygen analysis. These two physical features, along with temperature, are the benchmarks physical oceanographers rely upon to track the ocean circulation.

For an understanding of this process and an overview of the project, I met with Molly Baringer in her office – a large bench that the ship’s carpenter built on deck. It seats three and is similar to a lifeguard stand, so it can give a view of the water and fit over the [dis]array of equipment constantly being shifted around the fantail by various scientists and deck hands. With the calm seas and sunny weather, it is the perfect spot on the ship to sit with a laptop to outline daily assignments for all of us, review the mass of data streaming in, and relax to watch the sunset.

“When I am playful,
I use the meridians of longitude and parallels of latitude for a seine,
and drag the Atlantic Ocean for whales!”

Mark Twain

Scientists and crew prepare to retrieve a mooring before the next big wave!

Chief scientist Dr. Baringer is a physical oceanographer and so is interested less in the creatures moving around in the ocean and more about the water currents that are moving them around, and particularly the vast amount of heat that is transferred from the Equator to the Polar Regions by “rivers in the sea” like the Gulf Stream.

 Currents and storms in our atmosphere produce our daily weather patterns, which of course change seasonally too. Ocean currents work on a much longer time scale and the text book example of the turnover time of warm water moving Pole-ward, cooling and returning to the Tropics as “centuries.” This timeframe infers that dramatic fluctuations in climate do not occur.

However, by analyzing ice cores from Greenland, scientists recently have detected evidence of abrupt changes in climate – particularly a significant cooling event 8,200 years ago – that could be associated with vacillations in the Gulf Stream. Although lacking a blackboard at her impromptu lecture hall on deck, a patient Dr. Baringer was artful in walking me through a semester of climatology and modeling to highlight the implications of an oscillating Gulf Stream and its deepwater return waters – the Deep Western Boundary Current.

Surface water is driven from the southern latitudes towards the Poles along the western side of the Atlantic, constantly deflected in a clockwise pattern by the Earth’s rotation. Bathing Iceland with warm and saltier water and keeping it unusually mild for its sub-polar latitude, the Gulf Stream divides here with some water flowing into the Arctic Sea and the rest swirling down the Eastern Atlantic moderating the climate in Great Britain, France and Portugal. (This explains the presence of a rugged little palm tree that I once saw growing in a Scottish garden.)

Perturbations in the northward flow of heat by meanderings of the Gulf Stream or the smothering of it of it by lighter fresh waters from melting ice in Greenland and Canada appears play a significant role in occasionally upsetting Europe’s relatively mild and stable climate – which is bad enough. What is more alarming is new evidence that these changes don’t necessarily occur gradually over centuries as once assumed, but can take place rapidly, perhaps over decades.

There is more bad news. The surface of the sea is dynamic and even without wind and waves, there are gentle hills and valleys between areas. I remember my surprise when our physical oceanography teacher, Richard Hires, pointed out that because of warmer water and displacement by the Earth’s rotation, Gulf Stream waters are about a meter higher than the surrounding ocean…that to sail East into it from New Jersey, we are actually going uphill. If these giant boundary currents are suppressed in their movements, it will exasperate an ongoing coastal problem as those hills and valleys of water flatten, resulting in rising sea levels and erosion along northern coastlines.

This explains why we are “line sailing” at 26.5 North, sampling water and monitoring sensors arrayed on the parallel of latitude between Africa and the Bahamas. To measure change, it is necessary to have baseline data, and the stretch of the Atlantic is the best place to collect it.

Snap shots of the water column are taken using the CTD apparatus as we sail an East-West transect, but at $30-50,000. Per day for vessel time, this is not practical or affordable. Here is where moorings, data recorders and long-life Lithium batteries come into play. By anchoring a line of sensors in strategic locations and at critical depths to take hourly readings, year-long data sets can be recorded and retrieved periodically. Not only does this save time and money, it is the only way to generate the ocean of data for researchers to analyze and create a model of what is happening over such a vast region – and what may occur in the future.

For more specific details, check out the project overview.

Deep Western Boundary Current Transport Time Series to study:
-the dynamics and variability of ocean currents;
-the redistribution of heat, salt and momentum through the oceans;
-the interactions between oceans, climate, and coastal environments; and
-the influence of climate changes and of the ocean on extreme weather events.
Information at:  http://www.aoml.noaa.gov/phod/wbts/ies/index.php

We hear that “The package is on deck” and it is time to collect water samples from the 24 different depths the Niskin bottles were fired (Remotely closed). As any aquarist will assure you, as soon as seawater is contained it begins to change, so we always start with the bottom water and work around to the top water since dissolved oxygen levels can drop with rising temperatures and biological activity from planktonic creatures trapped along with the water samples.

Although as oceanography students we read that most ocean water is quite cold (~3.5C)  because only the top 100 meters soaks up the warmth from sunlight, it is still an awakening for me to fill the sample bottles with even colder bottom water. After a half hour of rinsing and filling bottles, my hands are reminded of the times I worked in an ice cream parlor restocking containers from the freezer and filling soft-serve cones. It is a delight to get to the last several bottles of warm (25C) surface water.

Once the DO and salinity bottles are filled, they are removed to the chemistry lab and the Niskins are all mine. By holding a small plankton net under them as they drain excess water, I try my luck at catching whatever has almost settled to the bottom. There is an extra bonus too. A patch of floating Sargassum weed that tangled in the rosette was retrieved by the technician and set aside for me to inspect.

Windrows of Sargassum weed drift past the Ron Brown

Here is what I found under the microscope so far:

From depth:

The bottom water is absolutely clear with no obvious life forms swimming around. However a magnification of 50x’s and the extra zoom of my handy digital camera set-up reveals a number of things of interest I am sorting into AB&C’s:
Abiotic: Specks of clear mineral crystals. Are these minute sediments washed from the mainland or nearby Caribbean islands? Or is it possible they are quartz grains carried from much greater distances, like the Saharan dust that satellite images have proven are swept up by desert winds and carried all the way across the Atlantic?

Biotic: Although I can not find anything living, the silica dioxide skeletons (frustules) of at least two species of diatoms are present. These fragile fragments of glass accumulate in deep sediments below highly productive zones in the sea and different species are useful to paleontologists for determining the age of those deposits. On land, fossil diatom deposits are mined for diatomaceous earth – used as an abrasive and cleaner, pool filter material, and even in nanotechnologyresearch applications. There is other detrital material in the samples, but nothing identifiable.

Celestial(?): One tiny round particle caught my attention under the microscope. It looks like the images I’ve seen of microtektites – glassy and metallic meteor particles that have been molded by the heat of entry into the atmosphere. The Draxler brothers, two science students in Massachusetts, collect them and I hope they will confirm my identification when I see them again.

Dust particle (Right) and foraminifera (Center)

From the surface:

The warm, sunlit surface water here is covered with Sargassum weed, a curious algae that sustains an entire ecosystem in the waters mariners named the Sargasso Sea. On board the Brown it is simply called “weed” in part because it can be a minor nuisance when entangled with equipment. The Sargassum’s air bladders that support it at the surface reminded Portuguese sailors of their sargazagrapes and they named the gulfweed after them.

Can you spot the two Sargassum shrimp next to the air bladder?

Floating Sargassum weed harbors a great variety of other creatures including baby sea turtles, crustaceans and especially bryozoan colonies. The film of life encrusting the weed is sometimes called aufwuchs by scientists and is a combined garden and zoo.

A quick rinse in a plastic bag revealed two species of bryozoan and numerous tiny crustaceans. The Phylum Bryozoa is the “moss animals” a puzzling colonial creature to early biologists. Bryozoans are an ancient group with a long fossil record and are used by paleontologists as an “index” species to date sediments.

Byozoan colony

To my delight there were also some foraminifera in the samples. “Forams” as they are called by researchers, are single celled protozoa with calcium carbonate skeletons. They are abundant and widespread in the sea; having had 330 million years to adjust to different habitats – drifting on the surface in the plankton community and on benthic habitats on the bottom.

It is not necessary for you to go to sea with a microscope to find them. I have seen their skeletons imbedded in the exterior walls of government buildings in Washington, DC; and our own lab building at Sandy Hook, NJ has window sills cut from Indiana limestone – formed at the bottom of the warm Mesozoic seas that once covered the Midwest. In the stone, a magnifying glass reveals pin-head sized forams cemented among a sea of Bryozoan fragments. Some living forams from tropical lagoons are large enough to be seen without a magnifier, and  are among the largest single-celled creatures on the planet. With a drop of acid (The acid test!) our Geology students confirm that our window sills are indeed made of limestone as the drops fizzing reaction releases carbon dioxide sequestered when the animal shell formed.

Living foraminifera eat algae, bacteria and detritus and are fed upon by fishes, crustaceans and mollusks. Dead forams make contributions to us by carrying the carbon in their skeletons to the bottom where it is sequestered for long geological periods.

Geologists also use different species of forams as “index” species to fix the date of strata in sediment cores and rocks. The appearance and demise of their different fossil assemblages leave a systematic record of stability and change in the environment; and paleoclimatologists use the ratios of Carbon and Oxygen isotopes in their skeletons document past temperature ranges.

Our first plankton samples extracted from the deepest samples retrieved from the Niskin bottles at 4,000 meters (2.5C) did not produce any forams. This may be because in deep, cold water, calcium carbonate is more soluble and the skeletons dissolve. Presumably why we identified only the glassy tests of diatoms.

Foraminifera shell at 100x’s

Tiny Paramecia swarm over the detritus in my slide and taking a closer look at that and the growth associated with the weed I am reminded of Jonathon Swifts jingle:

Big fleas have little fleas
Upon their backs to bite ‘em
And little fleas have lesser fleas

And so, ad infinitum 


Sunset over the Sargassum Sea

The Chief Scientist:

A day in the life of our chief scientist involves: checking with her staff to evaluate the previous day’s collections, consulting with visiting scientists on their needs and any problems that might arise, checking with the deck hands and technicians about equipment needs and repairs, advising the ship’s officers of any issues, and making certain we are on course and schedule for the next station.

And then rest? Hardly!

Even when off duty there are inquiries to field from staff, scientists and crew; equipment repairs to be made; and software that needs to be tweaked to keep the data flowing.

How does one prepare for a career like this?
Physically: the capacity to function on little sleep so you can work 12-hour shifts and be on-call the other twelve. (And there is little escape at mealtimes either, where the conversation never stays far from the progress of the cruise.)Mentally: the capability to multi-task with a variety of very different chores.
Emotionally: the flexibility to accommodate people with many different personalities and  needs, while staying focused on your own work.
Also, excellent organizational skills, since months of planning and preparation are crucial.
And perhaps most importantly, a sense of humor!

 

 ”Lock-and-Load!
Midnight shift.
Chief Scientist Dr. Molly Baringer prepares to fire the XBT
off the stern for an 800 meter profile of temperature and pressure.

Jessie Soder: Geology on Georges, August 17, 2011

NOAA Teacher at Sea
Jessie Soder
Aboard NOAA Ship Delaware II
August 8 – 19, 2011 

Mission: Atlantic Surfclam and Ocean Quahog Survey
Geographical Area of Cruise:  Northern Atlantic
Date: Wednesday, August 17, 2011

Weather Data
Time: 12:00
Location:  41°19.095 N, 71°03.261
Air Temp:  22°C (°F)
Water Temp:  21°C (°F)
Wind Direction: South
Wind Speed: 7 knots
Sea Wave height:  0
Sea Swell:  0

Science and Technology Log

Gulf of Maine: Including Georges Bank

So far, we have spent this entire trip on Georges Bank.  This famous geographical location off the east coast of the United States is something that I had only heard about before this trip.  After several tows over the past week I have been able to see a variety of materials brought up from the ocean floor of Georges Bank.  I have seen loads of clams, empty shells, sand, mud and clay, and smooth polished rocks.  We have even pulled up a few boulders that must have weighed a couple of hundred pounds.  It was the smooth polished rocks that caught my attention. How would a rock from the bottom of the ocean become smooth and rounded?  It probably meant that Georges Bank must not have always been the bottom of the ocean.

During the Wisconsin Glaciation the ice reached its maximum around 18,000 years ago.  The Laurentide ice sheet paused in the area of Georges Bank and Cape Cod and left behind a recessional moraine that created these landforms.  This ice also had several meltwater streams flowing from it and these streams were responsible for the polishing the rocks and cutting some of the canyons found on the seafloor today.  The Northeast Channel off the northeast side of Georges Bank was the principle water gap for most of the meltwater.

Smooth Polished Rocks From the Ocean Floor

Georges Bank is a huge oval-shaped shoal bigger than Massachusetts that starts about 62 miles offshore.  It is part of the continental shelf and its shallowest areas are approximately 13 feet deep and its deepest areas 200 feet.  In fact, thousands of years ago Georges Bank used to be above water and an extension of Cape Cod.  About 14,000 years ago the sea rose enough to isolate this area and it was home to many prehistoric animals such as mastodons and giant sloths.  Today, traces of these animals are sometimes found in fishing nets!  These animals died out about 11,500 years ago when the sea level rose further and submerged the area.

Georges Bank is a very productive fishing area in the North Atlantic.  (The Grand Banks is more productive, but not as geographically accessible as Georges Banks.)  Why is Georges Bank a prime feeding and breeding area for cod, haddock, herring, flounder, lobsters, and clams?  It has to do with ocean currents.  Cold, nutrient rich water from the Labrador Current sweeps over the bank and mixes with warmer water from the Gulf Stream on the eastern edges of Georges Bank.  The mingling of these two currents, plus sunlight, creates an ideal environment for phytoplankton, which is food for the zooplankton.  In fact, the phytoplankton grow three times faster here than on any other continental shelf.  All of this plankton feeds the ecosystem of fish, birds, marine mammals, and shellfish that flourish on Georges Banks.

Personal Log

Yesterday we left Georges Bank for stations off the coast of Rhode Island.  After dark, I stepped out on the back deck and Jimmy pointed out the lights of Nantucket and Martha’s Vineyard.  We were in sight of land for the first time in a week.  It wasn’t long before people had their cell phones out and were making calls.

A few times during this trip I have thought about sailors in the past and how they would leave for months, and even years, at a time and not have contact with their families and loved ones until they returned.  I have had email contact this entire time, yet I am really excited to go home to see those that I miss.  I can hardly imagine what it would be like to be gone for a year with no contact at all.

Throughout this trip I have been getting to know others on this cruise.  I have learned that several of them have families and young children at home.  Many of them are at sea for many weeks, or months, a year.  After being on this cruise, I have gained a lot of respect for people who choose to work on the ocean for a living.  It takes a certain type of person who can work hard, maintain a positive attitude, and live away from their home and loved ones for extended periods of time.  It has been an honor to work with these people.

Caitlin Fine: Endings and beginnings, August 9, 2011

NOAA Teacher at Sea
Caitlin Fine
Aboard University of Miami Ship R/V Walton Smith
August 2 – 7, 2011

Mission: South Florida Bimonthly Regional Survey
Geographical Area: South Florida and Gulf of Mexico
Date: August 9, 2011

Personal Log

The last days of the survey cruise followed a pattern similar to the first days. Everyone got into the schedule of working 12-hour shifts and everyone accepted their role and responsibilities as a member of the team.

We all (morning and night shifts) ate dinner together and often (if there were no stations to be sampled) sat together to play board games, such as Chinese checkers.

Maria and I in the "stateroom" we shared

The scientific team plays Chinese checkers

We also all watched the sunsets together — each one was spectacular!

Science team at sunset

On the night of August 6th, we were towing the Neuston net through an area that had so many jellyfish that we could not lift the net out of the water. We had to get another net to help lift the heavy load. We all took bets to see how many jellyfish we had caught. I bet 15 jellyfish, but I was way off — there were over 50 jellyfish in the net! There were so many, that as we were counting them, they began to slide off the deck and back into the water. I have a great video that I cannot wait to share with you in September!

Moon jellies sliding off the deck!

Science equipment in the truck

The ship arrived back in Miami on Sunday night around 7:30pm. It was amazing how quickly everyone unloaded the scientific equipment and started to go their separate ways. Because the NOAA building (Atlantic Oceanographic and Meterological Laboratory, AOML) is located right across the street from where the Walton Smith docks, we loaded all of the equipment into a truck and delivered it to the AOML building.

This was great because I got a quick tour of the labs where Lindsey, Nelson and others run the samples through elaborate tests and computer programs in order to better understand the composition of the ocean water.

Lindsey in one of the NOAA labs

In reflecting upon the entire experience, I feel extremely fortunate to have been granted the opportunity of a lifetime to participate in Teacher at Sea. I was able to help with all aspects of the scientific research from optics, to chemistry, to marine biology as well as help with equipment that is usually reserved for the ship’s crew, such as lowering the CTD or tow nets into the water.

There were many moments when I felt like some of my students who are struggling to learn either English or Spanish. There are a lot of scientific terms, terms used to describe the equipment (CTD and tow net parts), and basic boat terminology that I had not been exposed to previously. I am thankful that all of the members of the cruise were patient with my constant questions (even when I would ask the same thing 3 or 4 times!) and who tried to explain complex concepts to me at a level that I would understand and be able to take back to my students.

I am using the GER 1500 spectroradiometer

It makes me reflect again on everything I learned during my MEd classes in Multicultural/Multilingual Education — a good educator empowers students to ask questions, take risks, ask more questions, helps students access information at their level, is forever patient with students who are learning language at the same time that they are learning new concepts, provides plenty of hands-on experiments and experiences so students put into practice what they are learning about instead of just reading or writing about it.

A porthole on the R/V Walton Smith

As we sailed into Miami, a bottlenose dolphin greeted us – sailing between the two hulls of the catamaran and coming up often for air. It was so close, that I could almost touch it! Even though I was sad that the survey cruise was over, it was as though the dolphin was welcoming me home and on to the next phase of my Teacher at Sea adventure: I return to the classroom in September loaded with great memories, anecdotes, first hand-experiences, and a more complete knowledge of oceanography and related marine science careers to help empower my students so that they consider becoming future scientists and engineers. Thank you Teacher at Sea!

Survey cruise complete, returning to Miami

Caitlin Fine: Flexibility! August 6, 2011

NOAA Teacher at Sea
Caitlin Fine
Aboard University of Miami Ship R/V Walton Smith
August 2 – 7, 2011

Mission: South Florida Bimonthly Regional Survey
Geographical Area: South Florida Coast and Gulf of Mexico
Date: August 6, 2011

Weather Data from the Bridge
Time: 4:24pm
Air Temperature: 31.6°C
Water Temperature: 32.6°C
Wind Direction: Southwest
Wind Speed:  4 knots
Seawave Height: calm
Visibility: good/unlimited
Clouds: partially cloudy (cumulous and cirrus clouds)
Barometer: 1013nb
Relative Humidity: 62%

Science and Technology Log

Many of you have written comments asking about the marine biology (animals and plants) that I have seen while on this cruise. Thank you for your posts – I love your questions! In today’s log, I will talk about the biology component of the research and about the animals that we have been finding and documenting.

We have another graduate student aboard, Lorin, who is collecting samples of sargassum (a type of seaweed).

Sargassum sample from Neuston net tow

There are two types of sargassum. One of those types usually floats at the top of the water and the other has root-like structures that help it attach to the bottom of the ocean.

Lorin is filtering a sample from the Neuston net in the web lab

We are using a net, called a Neuston net, to collect samples of sargassum that float. The Neuston net is towed alongside the ship at the surface at specific stations. This means that the ship drives in large circles for 30 minutes which can make for a rocky/dizzy ride – some of the chairs in the dry lab have wheels and they roll around the floor during the tow!

Towing the Neuston net along the side of the ship

Lorin and other researchers are interested in studying sargassum because it provides a rich habitat for zooplankton, small fish, crabs, worms, baby sea turtles, and marine birds. It is also a feeding ground for larger fish that many of you may have eaten, such as billfish, tuna, and mahi mahi.

Small crab that was living in the sargassum

The net not only collects sargassum, but also small fish, small crabs, jellyfish, other types of seaweed, and small plankton.

Small fish from the Neuston net

Plankton can be divided into two main categories: zooplankton and phytoplankton. As I  said in my last post, phytoplankton are mostly very small plants or single-celled organisms that photosynthesize (they make their own food) and are the base of the food chain. Zooplankton are one level up on the food chain from phytoplankton and most of them eat phytoplankton. Zooplankton include larva (babies) of starfish, lobster, crabs, and fish.

Small zooplankton viewed through the dissecting microscope

We also use a Plankton net to collect samples of plankton. This has a smaller mesh, so it collects organisms that are so small they would fall through the Neuston net. Scientists are interested in studying the zooplankton that we catch in the Plankton net to understand what larger organisms might one day grow-up and live in the habitats we are surveying. They study the phytoplankton from the Plankton net to see what types of phytoplankton are present in the water and in what quantities.

Washing off the Plankton net

Today we collected so many diatoms (which are a type of phytoplankton) in the Neuston net that we could not lift it out of the water! This tells us that there are a lot of nutrients in the water (a diatom bloom) – maybe even harmful levels. I am bringing some samples of the diatoms and zooplankton home with me so we can look at them under the microscopes at school!

Evidence of a diatom (phytoplankton) bloom in the Gulf of Mexico

The marine biologists on this cruise are mainly interested in looking at phytoplankton and zooplankton, but we also have seen some larger animals. I have seen many flying fish skim across the surface of the water as the boat moves along. I have also seen seagulls, dolphins, sea turtles, cormorants (skinny black seabirds with long necks), and lots of small fish.

Small flying fish from the Newston net

Personal Log

Working as an oceanographer definitely demands flexibility. I have already mentioned that we chased the Mississippi River water during our second day. After collecting samples, we had to find blue water (open ocean water) to have a control to compare our samples against.  We traveled south through the night until we were about 15 miles away from Cuba before finding blue water. All of this travel was in the opposite direction from our initial cruise plan, so we have had to extend our cruise by one day in order to visit all of the stations that we need to visit inside the Gulf of Mexico. This has meant waking-up the night shift so we can all change their airplane tickets and looking at maps to edit our cruise plan!

Changes to our cruise plan on the survey map

Many of you are writing comments about sharks – I have not seen any sharks and I will probably not see any. The chief scientist, Nelson, has worked on the ocean for about 33 years and he has sailed for more than 1,500 hours and he has only seen 3 sharks. They mostly live in the open ocean, not on the continental shelf where we are doing our survey. If there were a shark nearby, our ship is so big and loud that it would be scared away.

Playing with syringodium

Today I saw a group of about 4 dolphins off the side of the ship. They were pretty far away, so I could not take pictures. Their dorsal fins all seemed to exit the water at the same time – it was very beautiful. A member of the crew spotted a sea turtle off the bow (front) of the ship and I saw several different types of sea birds, especially seagulls.

Yesterday afternoon we passed through the Gulf of Mexico near the Everglades and there were storm clouds covering the coastline. The crew says that it rains a lot in this part of the Florida coast and that Florida receives more thunderstorms than any other state. It is strange to me because I always think of Florida as “the sunshine state.”

Grey sky and green water in the Gulf of Mexico

The color of the ocean has changed quite a lot during the cruise. The water is clear and light blue near Miami, clear and dark blue farther away from the coast in the Atlantic Ocean, cloudy and yellow-green in coastal Gulf of Mexico, and cloudy and turquoise in the Florida Bay. Scientists say that the cloudiness in coastal Gulf of Mexico is caused by chlorophyll and the cloudiness in the Florida Bay is caused by sediment.

It has been hot and sunny every day, but the wet lab (where we process the water samples and marine samples), the dry lab (where we work on our computers), the galley and the staterooms are nice and cool thanks to air conditioning! I can tell that I am getting used to being at sea because now when we are moving, I feel as though we are stopped. And when we do stop to take measurements, it feels strange.

Did you know?

NOAA does not own the R/V Walton Smith. It is University of Miami ship that costs NOAA from $12,000 to $15,000 a day to use!

Organisms seen today…

-       Many sea birds (especially seagulls)

-       2 cormorants (an elegant black sea bird)

-       10-12 dolphins

-       1 sea turtle

-       Lots of small fish

-       Lots of zooplankton and phytoplankton (especially diatoms)

-       Sargassum and sea grass

Heather Haberman: Plankton, July 9, 2011 (post #3)

NOAA Teacher at Sea
Heather Haberman

Onboard NOAA Ship Oregon II
July 5 — 17, 2011


Mission:  Groundfish Survey
Geographical Location:  Northern Gulf of Mexico
Date:  Saturday, July 09, 2011

Weather Data from  NOAA Ship Tracker
Air Temperature:  30.4 C   (86.7 F)
Water Temperature: 29.6 C   (85.3 F)
Relative Humidity: 72%
Wind Speed: 6.69 knots   (7.7 mph)

Preface:  Scroll down the page if you would like to read my blog in chronological order.  If you have any questions leave them for me at the end of the post.

Science and Technology Log

Topic of the Day:  Plankton, the most important organisms on the planet.

Say the word plankton to a class full of students and most of them will probably think of a small one-eyed cartoon character.  In actuality plankton are some of the most important organisms on our planet.  Why would I so confidently make such a bold statement?  Because without plankton, we wouldn’t be here, nor would any other organism that requires oxygen for life’s processes.

Plankton are a vital part of the carbon and oxygen cycles.  They are excellent indicators of water quality and are the base of the marine food web, providing a source of food and energy for most of the ocean’s ecosystem’s.  Most plankton are categorized as either phytoplankton or zooplankton.

Question:  Can you identify which group of plankton are the plants and which are the animals based on the prefix’s?

Simple marine food web. Image: NOAA

Phyto comes from a Greek word meaning “plant” while planktos means “to wander”.  Phytoplankton are single-celled plants which are an essential component of the marine food web.  Plants are producers meaning they use light energy from the sun, and nutrients from their surroundings, to photosynthesize and grow rather than having to eat like animals, which are consumers.   Thus producers allow “new” energy to enter into an ecosystem which is passed on through a food chain.

Because phytoplankton photosynthesize, they also play an important role in regulating the amount of carbon dioxide in our atmosphere while providing oxygen for us to breathe.  Scientists believe that the oceans currently absorb between 30%-50% of the carbon dioxide that enters into our atmosphere.

Did you know:  It is estimated that marine plants, including phytoplankton, are responsible for 70-80% of the oxygen we have in our atmosphere.  Land plants are only responsible for 20-30%.

Diatoms are one of the most common forms of phytoplankton. Photo: NOAA

Question:  Since phytoplankton rely on sun and nutrients for their energy, where would you expect to find them in greater concentrations, near the coast or far out at sea?

Red and orange indicate high concentrations of phyoplankton. Concentrations decrease as you go down the color spectrum. Image from NASA's SeaWiFS mission

Notice the greatest concentration of phytoplankton occur near coastal areas.  This is because they rely on nutrients such as nitrogen and phosphorus for their survival.  These nutrients are transferred to the sea as rains wash them from our land into the rivers and the rivers empty the nutrients into the sea.  We’ll address the problems this is causing in my next blog.

Did you know:  The ocean is salty because over millions of years rains and rivers have washed over the rocks, which contain sodium chloride (salt), and carried it to the sea.

It is easy to identify water that’s rich in phytoplankton and nutrients because the water is green due to the chlorophyll pigment plankton contain.  The further away from the nutrient source you get, the bluer the water becomes because of the decrease in the phytoplankton population.

This tool is called a Forel/Ule scale. It is used to obtain an approximate measurement of surface water color. This helps researchers determine the abundance of life in the water.

Let’s go up a step in the marine food web and talk about zooplankton.  Zoo is Greek for animal.  Most zooplankton are grazers that depend on phytoplankton as a food source.  I’ve learned that larval marine life such as fish, invertebrates and crustaceans are classified as zooplankton until they start to get their adult coloration.  After hatching from their eggs marine larva are clear and “jelly like” which is an adaptation that helps them avoid being eaten by predators.  Camouflage is their only line of defense in this stage of development.

A zooplankton sample we collected aboard the Oregon II using a neuston net. Notice the small juvenile fish and all of the clear "jelly like" larva.

When plankton samples are collected two different methods are used.  One method uses a neuston net which skims the surface of the water for 10 minutes.  See the video below to watch a sample being collected.

I am securing the neuston net to the metal frame by lacing it with a line (rope for all of you land lovers)..

The second method is using the bongo nets which are deployed at a 45 degree angle until they are a meter shy of the ocean floor, then they are brought back up.  This method collects samples from the vertical water column rather than just the surface.  The samples we collect with the bongo net look much different from the samples we collect with the neuston net.  Bongo samples are filled with more larva and less juveniles.

Bongo nets getting ready to be lowered into the water column. They are called bongo nets because they resemble bongos. Photo: SEFSC

Plankton surveys are done in an effort to learn more about the abundance and location of the early life stages of fish and invertebrates.  All of the samples we collect are preserved at sea and are then sent to the Sea Fisheries Institute in Poland.  This is where all of the identification of fish larva and other zooplankton takes place.  This information is then used by researchers to study things such as environmental quality requirements for larva, mortality rates, population trends, development rates and larval diets.

On the right is the "cod end", or plankton collection chamber, which attaches to the end of the nets. We then sieve the contents of the cod end and funnel it into a jar along with some preservative.

Personal Log:

My last log mentioned bycatch as one of the bad things about bottom trawling.  Another problem associated with bottom trawling is the destruction of habitats as the net and “doors” sweep along the ocean floor.  So far we have had two nets tear as a result of this collection method.  It’s a good thing they keep ten extra nets onboard as back ups!

Here are some of the extra nets that are kept on deck.

Aside from the nets tearing off there has also been a problem with the wire that deploys the net.  It has been twisting which prevents the “doors” from opening the net wide enough for a good sample collection.  The crew has tried extending all of the wire off of the reel in an effort to untwist it.  It seems to be working well, but we still need to keep a close eye on it.

I have also had the opportunity to be the hottest I have ever been in my entire life.  We had an abandon ship drill where everyone had to get into their immersion suits.  Picture yourself in the Gulf of Mexico, standing on a black deck, in the middle of the day, in July, while putting on a full body jump suit made of neoprene.  Hopefully we won’t have to use them at any point during the cruise.

Trawling for Krill

NOAA Teacher at Sea: Tammy Orilio
NOAA Ship Oscar Dyson
Mission: Pollock Survey
Geographical Area of Cruise: Gulf of Alaska
Date: 29 June 2011

Weather Data from the Bridge:

Latitude: 58.01 N
Longitude: -152.50 W
Wind: 23.95 knots
Surface Water Temperature: 9.4 degrees C
Air Temperature: 10.8 degrees C
Relative Humidity: 71%
Depth: 177.72 m



Science & Technology Log:
What are krill, you ask? They’re animals in the Phylum Arthropoda, which means they’re related to insects, spiders, crabs, lobsters, etc. They have jointed legs and an exoskeleton, are usually a couple centimeters in length, and are reddish/orange-ish in color. They can often be found in dense schools near the surface of the water, and play an important role in the ecosystem as a source of food for lots of larger animals (like fish, whales, & penguins).

I’ve mentioned the two types of trawl gear that we use to catch fish, but if we want to catch smaller things like plankton, the mesh on those nets is way too small. Therefore, we use a third type of trawl called the Methot which has very fine mesh to corral the plankton down into a collection container at the end of the net. In addition to having a hard container at the end- as opposed to just a bag/codend that you see in the fish trawls- the Methot trawl also has a large metal frame at the beginning of the net. Check out the photos below.

The Methot trawl being taken out of the water. Note the square frame.

The Methot trawl being taken out of the water. Note the square frame.

The container that collects all of the plankton in the net.

The container that collects all of the plankton in the net.

After the net is brought back on deck, one of the fishermen or deckhands brings the container of krill into the fish lab. The first thing we do is dump the container into a sieve or a bucket and start picking out everything that isn’tkrill. The two most common things that are collected (besides krill) are gelatinous animals (like jellyfish & salps) and larval fish. The fish get weighed (as one big unit, not individually) and then frozen for someone to look at later on.

The larval fish that we separated from one plankton tow.

The larval fish that we separated from one plankton tow.

After sorting the catch, we’re left with a big pile of krill, which gets weighed. We then take a small subsample from the big pile of krill (it’s a totally random amount- depends on how much we scoop out!) and then weigh the subsample. Then the fun begins, as I’m the one that does this job- I get to count every single individual krill in the subsample. Tedious work. All of the data is then entered into the computer system, and the krill and anything else that we’ve caught (besides the larval fish) are thrown back into the water.

Sorting through the big pile of krill.

Sorting through the big pile of krill.

How many individual krill are in this picture? You get a prize if you're the closest without going over :)

How many individual krill are in this picture? You get a prize if you're the closest without going over :)

Personal Log:
I mentioned that once we’re done with the krill, we throw it back into the water- that was until I came aboard! My eel (Ms. Oreelio for those of you that don’t know!) eats dried krill, and I’m going to run out soon, so I figured I’d take these krill home with me! I got a gallon-size baggie from the galley (kitchen) and filled it up with krill, and holy cow, it’s a lot!! I stuck it in our freezer- which is at -22 degrees C (or 7.6 degrees F) so now I have a big frozen block of krill to take back home with me. What a great souvenir.

Sue Zupko: 9 Under the Sea

NOAA Teacher at Sea: Sue Zupko
NOAA Ship: Pisces
Mission: Study deep water coral off the east coast of FL
Geographical Area of Cruise: SE United States from off Mayport, FL to Biscayne Bay, FL
Date: June 3, 2011

Weather Data from the Bridge
Position: 29.1°N 80.1°W
Wind Speed: Light and variable
Wind Direction: 112 true
Visibility: 10 n.m.
Surface Water Temperature: 28.6°
Air Temperature:28.2°
Barometric Pressure:1015.3
Water Depth: 82 m
Salinity: 36.5
Wet/Dry Bulb: 28.2/24.5

Red fish called Big Eye hovering over a rough sand bottome with a small fish below it.

Big Eye

Before reading further, vote on the survey above.

I was reminded on this voyage that colors change at depth in the ocean.  If you were swimming at 60 feet, you wouldn’t see reds.  Jana said she cut her leg while diving a few years ago at 60 feet.  She watched the blood coming from the cut and it was black to her eye.  Knowing it was probably wise to come to the surface with a cut like that in the open ocean, she started ascending (coming up).  At 30 feet she stopped to look at her cut.  The blood was green.  Is Jana a Vulcan?  As she rose to the surface, she continued to watch her blood flow from the cut.  At the surface, finally, the blood was red.

Light is interesting.  The white light we see has all the colors coming from it.  When you think of the rainbow, red has the shortest wavelength.  When your friend is wearing a red shirt, you are actually seeing the red wavelengths reflecting (bouncing) back to hit your eye.  So, your mind sees red.  It doesn’t mean you’re angry (Get it? That’s a joke).  However, in water, particles, such as detritus and plankton,and the water itself, get in the way and block or absorb the wavelengths.  Since red is a short wavelength, it gets interfered with quickly.   The longer, blue wavelengths can reach down farther.  Now, think back to our Big Eye example.  He’s red.  However, at depth he looks black and is camouflaged against the background of dark rocks and shadows.

Try this at home.  Take a red or blue transparent bottle.  I have a red water bottle that I can see through.  Put a blue object behind it such as an internet cable or a shirt.  What color does the object appear to be now?  I’ll bet a really dark purple or a black.  You might try a blue transparency over a red picture.  One of my students, Kaci, was creating a PowerPoint slide show.  His background was patriotic with red, white, and blue stripes.  He wanted to pick a contrasting color to continue the patriotic theme of red, white, or blue.  As a solution, he chose a transparent rectangle as a background to dark blue letters.  The colors turned out a bit strange in the background and he had to fiddle with his transparency a bit.  That is similar to the fish color being distorted by the water when there is little light at depth.

When the ROV (Remotely Operated Vehicle) shines its light on the fish, we see the real color of the Big Eye. There is very little distance for the water and particles in the water to distort the red color.  The LED (Light Emitting Diode) headlights on the ROV have a powerful beam so we can see the real color of the fish.

To read more on how color works in water, click here.

Pink hogfish swimming away from the camera.

Hogfish

A red coral with a little scorpion fish next to it on the left

Soft coral called a gorgonian

Barbara Koch, October 5, 2010

NOAA Teacher at Sea Barbara Koch
NOAA Ship Henry B. Bigelow
September 20-October 5, 2010

Mission: Autumn Bottom Trawl Survey Leg II
Geographical area of cruise: Southern New England
Date: Tuesday, October 5, 2010

Weather from the Bridge
Latitude 40.63
Longitude -72.92
Speed 4.80 kts
Course 293.00
Wind Speed 19.13 kts
Wind Dir. 139.69 º
Surf. Water Temp. 18.76 ºC
Surf. Water Sal. 31.62 PSU
Air Temperature 16.20 ºC
Relative Humidity 89.00%
Barometric Pres. 101.44 mb
Water Depth 28.52 m
Cruise Start Date 10/2/2010

Science and Technology Log

In addition to collecting data about fish species in the Southern New England Atlantic Ocean, NOAA Ship Henry B. Bigelow is also collecting information about the ocean’s climate and plankton numbers. lankton refers to microscopic plants (phytoplankton), animals (zooplankton), decomposers (bacterioplankton), and the fish eggs and larvae of larger fish (ichthyoplankton). Plankton forms the base of the ocean food web. Phytoplankton is the food source for zooplankton, which in turn is the food source for larger fish. Water salinity and termperature (climate) are directly related to the production of plankton. A change in climate can cause a decrease in the production of plankton, therefore, less food for developing fish species. Low numbers of fish at the bottom of the food web means less food for fish at the top of the food web.

Reviewing Data

Reviewing Data

Plankton samples are taken at random trawl stations during the cruise. I had the opportunity to observe and assist the Senior Survey Technician, Jim Burkitt, during one sampling. Burkitt uses a Bongo Paired Zooplankton net system, which consists of two stainless steel cylinders with instruments that measure water flow, and two cone-shaped, fine mesh nets attached. The nets are lowered into the ocean and dragged alongside the ship for a specified amount of time, and at all levels of the ocean column. Burkitt monitors the location of the nets via computer during the sampling to ensure that the nets do not touch the ocean floor, thus gathering sediment instead of plankton.

Sampling

Sampling

Retrieving the nets

Retrieving the nets

The crew retrieves the nets at the end of the sampling period and places it on the deck of the ship. Once the nets are back on deck, we rinse the plankton from the top to the narrow, tied end of the nets byspraying the nets from the top towards the bottom.

Rinsing the plankton

Rinsing the plankton

Plankton

Plankton

Finished Sample

Finished Sample

When the catch is located at the bottom of the nets, we untiethe bottom and continue rinsing the sample into metal strainers. The top strainer has a large mesh screen to trap jelly fish and other organisms trapped in the net and to allow the smaller plankton to fall through to the lower strainer, which has a very small mesh screen used to collect the plankton sample. Here is what the sample looked like.

Finally, we carry the samples into the lab where we rinse the plankton into jars, add formaldehyde as a preservative, and seal the jars. The jars will be taken to the lab in Woods Hole for further analysis.

Personal Log

Northern Stargazer

Northern Stargazer

Armored Searobin

Armored Searobin

Even though many of our towing days were lost to gale force winds, we did end the cruise by catching some interesting species. First, was the Northern Stargazer (Astroscopus guttatus). The Northern Stargazer is found in shallow waters along the eastern seaboard from North Carolina to New York. It has a large head, small eyes on top of its head, and a large upward turned mouth. The Northern Stargazer buries itself in the sand on the ocean floor and waits for prey to swim by. Northern Stargazers also have an electrical organ around the eyes that can give us a jolt if we touch it.

Another interesting catch was the Armored Searobin (Peristedion miniatum). This species is bright crimson and is totally covered with bony plates. It can grow to be 13-14 inches long. It is found in the warm waters along the outer edge of the continental shelf in waters from Georges Bank off of Cape Cod, Massachusetts all the way down the Atlantic to Charleston, South Carolina.

Monkfish

Monkfish

We also caught Monkfish or Goosefish (Lophius americanus). This fish is found along the eastern seaboard of the United States from Grand Bank down to Cape Hatteras, North Carolina. Monkfish live on the bottom of the ocean in sand, mud and shell habitats, and feed on whatever prey is abundant. The meat is said to taste a lot like lobster tail, and therefore is often referred to as “poor man’s lobster.”

striped sea bass

striped sea bass

More striped sea bass

More striped sea bass

Our most exciting catch came when we hauled in 212 striped sea bass! Striped bass occur along the Atlantic coast from the St. Lawrence River in Canada all the way down to Florida. They live near the coast, in bays and tidal rivers. Striped bass have been very important to the United States fishing industry for centuries. The largest one we caught was 103 cm long and weighed 11.26 kg!

I thoroughly enjoyed my time working and learning during the second leg of the Autumn Bottom Trawl Survey cruise. It was a great opportunity to see research at work in a real world setting, and I’m sure my students will benefit from everything I’ve experienced. I want to thank the scientists from the Northeast Fisheries Science Center (NEFSC), the NOAA Teacher at Sea Program, and the crew aboard NOAA Ship Henry B. Bigelow for allowing me to be a part of your lives for twelve days. If any of you teachers out there are interested in applying to the Teacher at Sea Program, I highly recommend it. Check out their website at http://teacheratsea.noaa.gov/.

Barbara Koch, September 30, 2010

NOAA Teacher at Sea Barbara Koch
NOAA Ship Henry B. Bigelow
September 20-October 5, 2010

Mission: Autumn Bottom Trawl Survey Leg II
Geographical area of cruise: Southern New England
Date: Tuesday, September 30, 2010

Weather Data from the Bridge

Latitude 41.53
Longitude -71.32
Speed 0.00 kts
Course 58.00
Wind Speed 16.00 kts
Wind Dir. 143.26 º Surf.
Water Temp. 18.79 ºC
Surf. Water Sal. 31.45
PSU Air Temperature 21.50 ºC
Relative Humidity 91.00 %
Barometric Pres. 1014.67 mb
Water Depth 12.53 m
Cruise Start Date 9/27/2010

Science and Technology Log

NOAA Ship Henry B. Bigelow is now docked in Newport, Rhode Island due to a deep trough of moisture from the East Pacific and Tropical Storm Nicole in the Atlantic moving up the Atlantic coast towards New England. The National Weather Service has issued a gale warning, because winds associated with this weather system are causing rougher seas, and it is too dangerous for the ship to continue trawling the ocean floor. When ships are at sea conducting research, it is vitally important that NOAA monitors current weather and wave conditions to insure the safety of the crew and scientists aboard their vessels. Actually, NOAA provides current weather information for everyone in America, including commercial fishermen and all of us on land. Visit NOAA’s National Weather Service website at http://www.nws.noaa.gov/ to see what’s happening today.

Our ship is equipped with instruments that collect weather and water data.Data is collected for wind speed, wind direction, water temperature, surface water salinity, air temperature, relative humidity, and barometric pressure. The information listed above under “Weather Data from the Bridge” is information gathered from the weather station located on top of the ship. Weather information is posted hourly. NOAA also has buoys placed in the waters around the United States, the Pacific and the Atlantic Oceans that collect data. Visit the National Data Buoy Center’s website at http://www.ndbc.noaa.gov/ to see where they are located and to read current data.

Henry B. Bigelow

Henry B. Bigelow

Wind movement in the atmosphere and water movement in the ocean are interrelated. When wind blows across the surface of the ocean, friction causes water molecules to move in a circular motion. Energy built up from friction transfers from one molecule of water to the next as each molecule rotates into the next. This action causes a wave to form. The size of the wave depends on three factors; the strength of the wind gust, the distance it blows (fetch), and the length of time it gusts (duration). NOAA’s buoys and ships collect wave measurements over a twenty minute sampling period for wave height (WHGT), wave period (APD), and the period with the strongest wave energy (DPD). A “gale warning” is issued when wind speeds are expected to measure 39-54 mph causing waves to reach between 18-25 feet in height. So, we are here until the seas calm down, which may be Saturday. While at dock, we’ll have time to explore Newport.

Personal Log

Foul weather gear

Foul weather gear

I’m really sad that we had to go in to port because I was just getting my sea legs and starting to feel comfortable with my work in the wet lab.But, I am glad to have a little time to wash my clothes.Everything I wear in the lab smells like fish! We wear our regular clothes, but put “foul weather gear” on over them before going into the wet lab. Foul weather gear consists of rubber boots, suspendered waterproof pants, and a waterproof rain jacket. Here is a picture of the gear hanging in the room where we get into our gear, and a picture of me in my pants holding a large skate. We store the pants over the boots so we can just step right in and pull the pants up, just like fire fighters. We always spray all the fish remnants off before we come back into this room to take off our gear.

Converyor belt in the wet lab

Converyor belt in the wet lab

We also wear rubber gloves during all of our work. The scientists have been using the blue gloves like the ones John is wearing at right, but scientists from past cruises commented they had a hard time holding onto the fish, so we are testing two other types of gloves on this cruise. The two gloves are rubber, but one is thick like the blue gloves and one is thinner.Both gloves have ridges on all of the fingers to allow for better gripping. I’ve been wearing the thicker orange gloves. So far, these gloves have worked well for me. I am able to easily pick up flat fish like flounder, but the sharp point of a scup’s dorsal fin poked through my glove once. That hurt! I’m just glad I didn’t have the thinner gloves on. A lot of fish slime also collects on the ridges throughout the watch. That’s easily remedied with a quick rinse from the nearby hose. Now, I think I’ll try out the blue gloves, so I can make a valid comparison.I’ll let you know my results at the end of the cruise.

Gloves

Gloves

Thomas Ward, September 13, 2010

NOAA Teacher At Sea: Thomas Ward
Aboard NOAA Ship Miller Freeman

Mission: Fisheries Surveys
Geographical Area of Cruise: Eastern Bering Sea
Date: September 13, 2010

The Procedure

The way that we collect data is done by three methods. They are the beam trawl, the benthic sled and the benthic grab. The beam trawl is a metal beam supported by a cable on the ship. Hanging from the beam is a net that when dragged behind the ship opens up. The trawl is pulled behind the ship for a specific amount of time.

The benthic sled is a piece of equipment that looks like it would be right at home on the snowy slopes of Central New York. It is a sled that gets dragged on the bottom and collects plankton (look out Eugene). The net is a finer mesh than the one used on the beam trawl. At the end of the net is a container that collects the plankton, we call it a cod end.  At the opening of the net is a device called the flow meter which looks like a little hand held fan. This performs the function of measuring the amount of water or flow that is going through the net. The meter has a counter on it and needs to be read and reset at each sampling station. This instrument gives the scientists a sense of the volume of water flowing into the net.

Flow Meter

Benthic Sled

The last device we are using is the benthic grab.  This device and the wet bulb on the bridge are instruments closest to my curriculum, Earth Science.  In fact, while on the bridge one officer asked another for the wet bulb temperature, very cool, I almost pulled out my sling psychrometer and compared data.  Any how, the grab is opened up and set and then lowered into the water.  When the grab hits the bottom, the weight and the downward force of the grab forces it shut, and into the bottom, scooping up sediment as it closes.  Of course because of the nature of this scientific expedition we are more concerned with organic matter than sediment.  I will have to say the scientist that I am working with have a natural curiosity toward all of Earth’s wonders.

These devices are deployed one at a time.  After each piece returns to the surface the crew maneuvers the ship so that subsequent samplings are performed at the same area.

I was going to write about life on board but the seas have gotten rougher and I am sea sick.

Peggy Deichstetter: Day 4 September 1

NOAA Teacher at Sea: Peggy Deichstetter
NOAA Ship Name: Oregon II
Mission: Bottom Longline Survey 2010
Geographical area of cruise: Gulf of Mexico

Me on the deck

Me on the deck

Day 4 Sept . 1

We are about an hour away from out first data collection area. This morning just before dawn I got a tour of the bridge. The CO showed my all the computers that keep track of where we are. I learned a lot, not only about the bridge but also about careers in NOAA.(National Oceanic and Atmospheric Administration) . NOAA is made up of several parts, the CO and I talked about the oceanic parts; the officers and crew who run the ship and the scientists. The officers follow the same rules as the military. If you are in the Navy you can transfer directly into this division.

Navigational Computers

Navigational Computers

The scientists do the actual research designed by NOAA to answer questions about the ocean. In this cruise we are counting, tagging and releasing shark. This will tell us about how many sharks are in this area at this time of year. NOAA has collected data for twenty year so they will be able to tell the health of the shark population.

To help collect information of the effect of the oil spill we are also doing water analysis and plankton tows.

After lunch we were taught how to do a plankton tow. I have done numerous plankton tows in my life but never on this scale. I used all the skills that I learned when I did research in the Arctic except on a much larger scale.