Patty McGinnis: Fishing for Science, May 16, 2013

NOAA Teacher at Sea
Patty McGinnis
Aboard R/V Ocean Starr
May 20 – May 29, 2013

Mission: Juvenile Rockfish Survey
Geographical Area of Cruise: Pacific Coast
Date: May 9, 2013

Personal Log

Hi everyone! I’m thrilled to have been selected for this opportunity of a lifetime! As a NOAA Teacher at Sea, I’m looking forward to learning about the oceans and to sharing that knowledge with you. I’ll be aboard R/V Ocean Star assisting scientists with their work in conducting a Juvenile Rockfish Survey. You can learn more about this important scientific work by clicking here. In my reading, I have found out that there are many species of rockfish, all of which are a commercially valuable groundfish. Since fisheries are a renewable resource, keeping track of the rockfish population is important for managing it wisely. This will involve trawling at night and then analyzing the catch–as my adventure unfolds I will be able to provide you with more details.

I currently work as a gifted support specialist at Arcola Intermediate School in Eagleville, Pennsylvania. I have also taught science (mostly biology) for over 20 years. My favorite part of teaching is watching a student’s face light up with excitement over a new idea. I’m passionate about my work–especially when it involves educating students about ecology and the role man plays in protecting natural resources. I also enjoy traveling and learning about how local people utilize the land–last summer I had an opportunity to go to Kenya. In the picture I am listening to a transmitter that is picking up signals from a radio-collared lion.

I know my experience as a Teacher at Sea will help me to better understand the type of work that a fishery biologist conducts and that I’ll also gain insight into the various careers that are necessary for supporting this research. I’ll be posting to this blog as often as I can–I hope you follow along!

Here I am listening for lions

Here I am listening for lions

Stacey Jambura: Not Your Average Fish Tail Tale July 16, 2012

Stacey Jambura
July 6 – 17, 2012
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Geographical Area of Cruise: Gulf of Mexico
(You can view the NOAA ShipTracker here: http://shiptracker.noaa.gov/shiptracker.html)
Date: July 16, 2012
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Weather Details from Bridge: (at 15:45 GMT)
Air Temperature: 28.8 ◦C
Water Temperature: 28.80 ◦C
Relative Humidity: 70 %
Wind Speed: 8.56 kts
Barometric Pressure: 1,017.68 mb

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Science and Technology Log

The Trawling Net

Trawling Net

Trawling Net

The trawling net is used to collect groundfish samples. It is deployed from the stern of the ship and towed for 30 minutes. The net is towed back in and brought onboard to be emptied. During this process it is important that everyone at the stern of the ship is wearing a hard hat and a personal flotation device in the unlikely event that something goes wrong. Once the net is lifted over the side of the ship and brought on deck, it is untied and emptied into large baskets.

Hauling the trawling net back onboard.

Hauling the trawling net back onboard.

The baskets are weighed before they are brought inside and emptied onto a large conveyor belt. The fish are spread out on the belt so they are easier to sort. The fish are sorted into individual baskets by species. Once all of the fish are sorted, we count them and find their total weight. We then work through each basket and measure, weigh, and identify the sex of each specimen. Once we are done measuring the fish, some are bagged, labeled and frozen for scientists to examine back at their labs. The rest of the fish are thrown back into the ocean.

Emptying the trawling net into baskets

Alex & Reggie emptying the net into baskets.

We found many different species of vertebrates and invertebrates (fish with a spine, and those without a spine). Here are some of the fish we found:

Vertebrates

Invertebrates

It is important to document the length and weight of each fish collected in a trawl. We used special measuring boards and scales to collect this data. There are two boards, each is connected to one computer. When we measure the fish, we use a magnetic wand. When it touches the board, it sends a signal to the computer which records the length of the fish. Fish are measure at one of three lengths: fork length, standard length, and total length. Once the fish are measured, they are placed on a scale to be weighed. The scale is also connected to the computer and records the weight of the fish.

Scale

Scale

Boards

Measuring Boards

Fork length is measured from the inside of the tail of the fish.

Fork length is measured from the inside of the tail of the fish.

Standard length is measure from the base of the tail of the fish.

Standard length is measure from the base of the tail of the fish.

Total length is measured from the tip of tail of the fish.

Total length is measured from the tip of tail of the fish.

Personal Log

Day 12 – July 16th

Today is my last day at sea before we dock in Pascagoula,Mississippi. It has been quite a journey and I can’t believe it is already over. Though the work was hard and hot (and many times smelly), it was an amazing experience and I hope to one day have the opportunity to experience it again! I have met many wonderful people and hope to keep in touch with them! I have learned so much about our oceans and the life within them. I hope that my blogs have given you a glimpse into what life onboard the Oregon II is like and I hope that you have learned something about the work that takes place on the open seas.

Map of our Survey

Map of our Survey

Although this is my last day on the Oregon II, keep an eye out for one final blog. There will be interviews with the crew of the Oregon II, what their job is, why they chose this line of work, the steps they took to become a crew member of the Oregon II, and words of advice for students everywhere!

Trawl Gear

NOAA Teacher at Sea: Tammy Orilio
NOAA Ship Oscar Dyson
Mission: Pollock Survey
Geographical Area of Cruise: Gulf of Alaska
Date: 24 June 2011


Weather Data from the Bridge:
Latitude: 54.14 N
Longitude: -164.16
Wind Speed: 9.73 knots
Surface Water Temp: 7.0 degrees C
Water Depth: 92.75 m
Air Temp: 7.2 degrees C
Relative Humidity: 101%

Science & Technology Log:
I’ve been talking a lot about trawling for fish, and I realize that some of you may not know exactly what I’m talking about, so let me explain. Trawling is a fishing method that pulls a long mesh net behind a boat in order to collect fish. Trawling is used to collect fish for both scientific purposes (like we’re doing) and also in commercial fishing operations. We have two types of fish trawls onboard the NOAA Ship Oscar Dyson- a mid-water trawl net and a bottom trawl net. We’ve used both types throughout our cruise, so let me tell you a little about each.

The mid-water trawl net is just as it sounds- it collects fish from the middle of the water column- not those that live on the seafloor, not those that live at the surface. The technical name for the net we have is an Aleutian Wing Trawl (AWT)- it’s commonly used by the commercial fishing industry. The end of the net where the fish first enter has very large mesh, which is used to corral the fish and push them towards the bag at the end. The mesh gets progressively smaller and smaller the further into it you go, and at the very end (where the collecting bag is), the mesh size is 0.5 inches. The end (where the bag is, or where the fish are actually collected) is called the codend. This is the kind of net we use when we want to collect a pollock sample, because pollock are found in the water column, as opposed to right on the seafloor (in other words, pollock aren’tbenthic animals). Our particular net is also modified a little from a “normal” AWT. Our trawl has three codends (collecting bags) on it- each of which can be opened and closed with a switch that is controlled onboard the ship. The mechanism that opens and closes each of the 3 codends is called the Multiple Opening and Closing Codend (MOCC) device. Using the MOCC gives us the ability to obtain 3 discrete samples of fish, which can then be processed in the fish lab. One other modification we have on our mid-water trawl net is the attachment of a video camera to the net, so we can actually see the fish that are going into the codends.

The MOCC apparatus, with the 3 nets extending off.

The MOCC apparatus, with the 3 nets extending off.

Part of the mid-water trawl net as it's being deployed.

Part of the mid-water trawl net as it's being deployed.

The camera apparatus hooked up to the trawl.

The camera apparatus hooked up to the trawl.

When we spot a school of fish on the acoustic displays, we then radio the bridge (where the captain is) and the deck (where the fishermen are) to let them know that we’d like to fish in a certain spot. The fishermen that are in charge of deploying the net can mechanically control how deep the net goes using hydraulic gears, and the depth that we fish at varies at each sampling location. Once the gear is deployed, it stays in the water for an amount of time determined by the amount of fish in the area, and then the fishermen begin to reel in the net. See the videos below to get an idea of how long the trawl nets are- they’re being reeled in in the videos. Once all of the net (it’s VERY long- over 500 ft) is reeled back in, the fish in the codends are unloaded onto a big table on the deck using a crane. From there, the fish move into the lab and we begin processing them.

The end of the trawl net. These are the lines that basically hold on to the net!

The end of the trawl net. These are the lines that basically hold on to the net!

The mid-water trawl net all reeled in.

The mid-water trawl net all reeled in.

One of the codends before being opened up.

One of the codends before being opened up.

The other type of trawl gear that we use is a bottom trawl, and again, it’s just as it sounds. The bottom trawl is outfitted with roller-type wheels that sort of roll and/or bounce over the seafloor. We use this trawl to collect benthic organisms like rockfish, Pacific ocean perch, and invertebrates. There’s usually a random pollock or cod in there, too. As I mentioned in my last post (“Today’s Catch”), the net can sometimes get snagged on rocks on the bottom, resulting in a hole being ripped in the net. Obviously, we try to avoid bottom trawling in rocky areas, but we can never be 100% sure that there aren’t any rogue rocks sitting on the bottom :)

The mesh and the wheels of the bottom trawl.

The mesh and the wheels of the bottom trawl.

More of the bottom trawl.

More of the bottom trawl.

The bottom trawl all reeled in.

The bottom trawl all reeled in.

Personal Log:
It’s been a quiet couple of days. On Wednesday, we didn’t see any fish until late in my shift, then we did a mid-water trawl. We ended up actually busting the bag- that’s how many fish we ended up collecting!! Once the codends were opened, we immediately began processing- first separating the pollock from everything else we caught. After sorting, I got to work on sexing the fish- it’s a kind of gruesome job, because you have to take a scalpel and cut them open (while they’re still alive!), exposing their innards- definitely NOT like the preserved organisms we dissect in class. I’m not a huge fan of cutting them open, so I moved on to measuring the length of the male fish- there were so many males in our catch, I was the last one working! After I cleaned up, that was the end of my shift. We were near some islands at the end of my shift, and the bridge called down to the lab to tell us that there some whales off the starboard side of the ship. I grabbed my camera and ran up to the deck, scanning the water for whales. Finally, I spotted a pod waaaay off the starboard side- they were too far off to get a good picture, and I couldn’t even tell what kind they were, but I was able to see them spouting water out of their blowholes, and it looked like one of them breached. The officers up on the bridge said they thought they were minke whales.

Thursday we didn’t see any fish (well, not enough to put our gear in the water) all day, so no fishing for me. Right now, it’s about 9:30 a.m. on Friday, and we’re just cruising to begin our next set of transects. I just read that there was an earthquake in the western Aleutian Islands last night- magnitude 7.2! Holy moly, I was just there! Apparently, people felt the earthquake as far east as Dutch Harbor on the island of Unalaska, and they had a tsunami warning go off. It’s crazy to think that I was in that area a couple days ago!

Question of the Day:

  • Speaking of tsunamis…What would cause the East Coast of the U.S. to be hit by a megatsunami?

We are Underway!

NOAA Teacher at Sea: Tammy Orilio
NOAA Ship Oscar Dyson
Mission: Pollock Survey
Geographical Area of Cruise: Gulf of Alaska
Date: 13 June 2011

Three Saints Bay, Alaska
Three Saints Bay, Alaska
This is what the window in my stateroom looks out to. It's a waterfall!
This is what the window in my stateroom looks out to. It’s a waterfall!

After being in Alaska since Friday June 10th, our ship has finally set sail!  The last of the crew and science team arrived this evening, and we immediately left port.  Our first stop is a calm bay so we can calibrate the acoustic equipment to establish some baseline data.  Once we got underway, we had a meeting with the science team, and I found out that I’d be working the 4 a.m. – 4 p.m. shift.  I’ll take that over the night shift any time!  I don’t have much to do for the next day or two, since we will not be trawling for fish yet, so I’m doing a lot of reading and napping.  Rough work.  I know the easy life will be over soon enough, so I have to take advantage while I can!My goal as we’re making way to our first sampling station is to not get seasick.  I’ve been out on two other research cruises, but they were on much smaller ships (R/V Bellows and R/V Suncoaster), and I was fine on those trips, so hopefully the same can be said for this excursion.  However, the Gulf of Alaska is a little more foreboding than the Atlantic Ocean between Florida and the Bahamas, so that’s definitely something to consider!  I just took one of my pills and put on some special wristbands that are supposed to help.  I have no idea what these wristbands actually do- my guess is that it’s all psychological and I just paid $10 for a placebo :)
I almost forgot to mention- my bags are here!  The science team checked them when they finally got their flight over to Kodiak from Anchorage.  It will be so nice to have real clean clothes- not new from the store clothes- to change into!

QUESTION OF THE DAY:

Penguins and alcids (a group of birds that includes auks, murres, and puffins) live in similar habitats and ecological conditions, but are found in two completely separate geographic areas.  Both groups of birds evolved to have similar characteristics.  What is this phenomenon called?I’m asking because I saw some murres today…but didn’t get any good pictures :(

We've been anchored here all day Tuesday 6/14/11.
We’ve been anchored here all day Tuesday 6/14/11.